Other packages > Find by keyword >

biogrowth  

Modelling of Population Growth
View on CRAN: Click here


Download and install biogrowth package within the R console
Install from CRAN:
install.packages("biogrowth")

Install from Github:
library("remotes")
install_github("cran/biogrowth")

Install by package version:
library("remotes")
install_version("biogrowth", "1.0.8")



Attach the package and use:
library("biogrowth")
Maintained by
Alberto Garre
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-10-22
Latest Update: 2025-03-17
Description:
Modelling of population growth under static and dynamic environmental conditions. Includes functions for model fitting and making prediction under isothermal and dynamic conditions. The methods (algorithms & models) are based on predictive microbiology (See Perez-Rodriguez and Valero (2012, ISBN:978-1-4614-5519-6)).
How to cite:
Alberto Garre (2020). biogrowth: Modelling of Population Growth. R package version 1.0.8, https://cran.r-project.org/web/packages/biogrowth. Accessed 15 Jul. 2026.
Previous versions and publish date:
(2026-07-09 07:22), 0.1.0 (2020-10-22 10:50), 0.1.1 (2020-11-12 01:40), 0.1.2 (2020-11-26 16:50), 0.2.0 (2021-01-27 19:40), 0.2.1 (2021-06-22 16:10), 0.2.2 (2021-07-06 18:10), 0.2.3 (2021-08-23 13:20), 1.0.0-1 (2022-05-31 18:00), 1.0.0-2 (2022-07-19 19:10), 1.0.0-3 (2022-08-28 22:50), 1.0.0 (2022-05-31 10:20), 1.0.1 (2022-12-02 19:50), 1.0.2 (2022-12-19 18:20), 1.0.3 (2023-08-19 02:22), 1.0.4 (2024-04-29 14:00), 1.0.5 (2024-11-08 18:50), 1.0.6 (2025-03-17 17:50)
Other packages that cited biogrowth R package
View biogrowth citation profile
Other R packages that biogrowth depends, imports, suggests or enhances
Complete documentation for biogrowth
Functions, R codes and Examples using the biogrowth R package
Some associated functions: CPM_model . DynamicGrowth . FitDynamicGrowth . FitDynamicGrowthMCMC . FitIsoGrowth . FitMultipleDynamicGrowth . FitMultipleGrowthMCMC . FitSecondaryGrowth . GlobalGrowthComparison . GlobalGrowthFit . GrowthComparison . GrowthFit . GrowthPrediction . GrowthUncertainty . IsothermalGrowth . MCMCgrowth . Q0_to_lambda . SecondaryComparison . StochasticGrowth . TimeDistribution . approx_env . arabian_tractors . biogrowth-package . calculate_gammas . calculate_gammas_secondary . check_growth_guess . check_primary_pars . check_secondary_pars . check_stochastic_pars . compare_growth_fits . compare_secondary_fits . conditions_pH_temperature . dBaranyi . distribution_to_logcount . example_cardinal . example_dynamic_growth . example_env_conditions . extract_primary_pars . extract_secondary_pars . fit_MCMC_growth . fit_dynamic_growth . fit_growth . fit_isothermal_growth . fit_multiple_growth . fit_multiple_growth_MCMC . fit_secondary_growth . full_Ratkowski . get_all_predictions . get_dyna_residuals . get_iso_residuals . get_multi_dyna_residuals . get_secondary_residuals . greek_tractors . growth_pH_temperature . growth_salmonella . is.DynamicGrowth . is.FitDynamicGrowth . is.FitDynamicGrowthMCMC . is.FitIsoGrowth . is.FitMultipleDynamicGrowth . is.FitMultipleDynamicGrowthMCMC . is.FitSecondaryGrowth . is.GlobalGrowthFit . is.GrowthFit . is.GrowthPrediction . is.GrowthUncertainty . is.IsothermalGrowth . is.MCMCgrowth . is.StochasticGrowth . iso_Baranyi . iso_repGompertz . lambda_to_Q0 . logistic_model . make_guess_factor . make_guess_primary . make_guess_secondary . multiple_conditions . multiple_counts . multiple_experiments . predictMCMC . predict_MCMC_growth . predict_dynamic_growth . predict_growth . predict_growth_uncertainty . predict_isothermal_growth . predict_stochastic_growth . primary_model_data . refrigeratorSpain . richards_model . secondary_model_data . show_guess_dynamic . show_guess_primary . time_to_logcount . time_to_size . trilinear_model . zwietering_gamma . 
Some associated R codes: CompareIsoGrowth_class.R . DynamicGrowth_class.R . FitDynamicGrowthMCMC_class.R . FitDynamicGrowth_class.R . FitIsoGrowth_class.R . FitMultipleDynamicGrowth_class.R . FitMultipleGrowthMCMC_class.R . FitSecondaryGrowth_class.R . GlobalGrowthComparison_class.R . GlobalGrowthFit_class.R . GrowthFit_class.R . GrowthPrediction_class.R . GrowthUncertainty_class.R . IsothermalGrowth_class.R . MCMCgrowth_class.R . S3_methods.R . SecondaryGrowthComparison_class.R . StochasticGrowth_class.R . TimeDistribution_class.R . baranyi_model.R . biogrowth-package.R . data.R . fit_dynamic_growth.R . fit_iso_growth.R . fit_multi_dynamic.R . fit_secondary_models.R . functions_counts.R . gamma_models.R . helpers.R . initial_guesses.R . meatinfo_primary.R . metainfo_secondary.R . model_comparison.R . predictMCMC.R . predict_MCMC_growth.R . predict_dynamic_growth.R . predict_isothermal_growth.R . predict_stochastic_growth.R . top_fit.R . top_predict.R .  Full biogrowth package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

PermAlgo  
Permutational Algorithm to Simulate Survival Data
This version of the permutational algorithm generates a dataset in which event and censoring times ...
Download / Learn more Package Citations See dependency  
gscaLCA  
Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression
Execute Latent Class Analysis (LCA) and Latent Class Regression (LCR) by using Generalized Structu ...
Download / Learn more Package Citations See dependency  
gamlss.add  
Extra Additive Terms for Generalized Additive Models for Location Scale and Shape
Interface for extra smooth functions including tensor products, neural networks and decision trees. ...
Download / Learn more Package Citations See dependency  
SECFISH  
Disaggregate Variable Costs
These functions were developed within SECFISH project (Strengthening regional cooperation in the are ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
binhf  
Haar-Fisz Functions for Binomial Data
Binomial Haar-Fisz transforms for Gaussianization as in Nunes and Nason (2009). ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA