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biocompute
View on CRAN: Click
here
Download and install biocompute package within the R console
Install from CRAN:
install.packages("biocompute")
Install from Github:
library("remotes")
install_github("cran/biocompute")
Install by package version:
library("remotes")
install_version("biocompute", "1.1.1")
Attach the package and use:
library("biocompute")
Maintained by
Soner Koc
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-11-28
Latest Update: 2022-05-03
Description:
Tools to create, validate, and export BioCompute Objects
described in King et al. (2019) .
Users can encode information in data frames, and compose
BioCompute Objects from the domains defined by the standard.
A checksum validator and a JSON schema validator are provided.
This package also supports exporting BioCompute Objects as JSON,
PDF, HTML, or 'Word' documents, and exporting to cloud-based platforms.
How to cite:
Soner Koc (2019). biocompute: Create and Manipulate BioCompute Objects. R package version 1.1.1, https://cran.r-project.org/web/packages/biocompute. Accessed 03 Feb. 2025.
Previous versions and publish date:
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Complete documentation for biocompute
Functions, R codes and Examples using
the biocompute R package
Some associated functions: biocompute-package . compose . compose_description . compose_error . compose_execution . compose_extension . compose_fhir . compose_io . compose_parametric . compose_provenance . compose_scm . compose_tlf . compose_usability . convert_json . convert_yaml . export_html . export_json . export_pdf . export_sevenbridges . export_word . generate_example . generate_id . is_bco . is_domain . pipe . read_bco . validate_checksum . validate_schema . versions .
Some associated R codes: api-core.R . api-interface.R . api-status-code.R . api-upload.R . api-utils.R . biocompute-package.R . compose-description.R . compose-error.R . compose-execution.R . compose-extension-fhir.R . compose-extension-scm.R . compose-extension.R . compose-io.R . compose-parametric.R . compose-provenance.R . compose-top-level-fields.R . compose-usability.R . compose.R . convert.R . export-docs.R . export-json.R . export-sevenbridges.R . read-bco.R . utils-cli.R . utils-compose.R . utils-export.R . utils-pipe.R . validate-checksum.R . validate-schema.R . version.R . Full biocompute package functions and examples
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