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biobouncer  

Validate Biological Identifiers and Inputs
View on CRAN: Click here


Download and install biobouncer package within the R console
Install from CRAN:
install.packages("biobouncer")

Install from Github:
library("remotes")
install_github("cran/biobouncer")

Install by package version:
library("remotes")
install_version("biobouncer", "0.1.4")



Attach the package and use:
library("biobouncer")
Maintained by
Samuel Bharti
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-09-03
Latest Update: 2026-09-03
Description:
Gene symbols, ontology terms, variant formats, and database accessions are validated through one small application programming interface (API), either offline against identifier patterns and bundled snapshots or live against a source web service. Results are designed to match those of the companion 'Python' package for the same inputs. Input order and length are preserved, and errors are reported explicitly rather than as a silent failure. Identifier patterns follow the registry and nomenclature described in Hoyt et al. (2022) <doi:10.1038/s41597-022-01807-3> and den Dunnen et al. (2016) <doi:10.1002/humu.22981>.
How to cite:
Samuel Bharti (2026). biobouncer: Validate Biological Identifiers and Inputs. R package version 0.1.4, https://cran.r-project.org/web/packages/biobouncer. Accessed 24 Oct. 2026.
Previous versions and publish date:
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Complete documentation for biobouncer
Functions, R codes and Examples using the biobouncer R package
Full biobouncer package functions and examples
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