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bikm1
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Download and install bikm1 package within the R console
Install from CRAN:
install.packages("bikm1")
Install from Github:
library("remotes")
install_github("cran/bikm1")
Install by package version:
library("remotes")
install_version("bikm1", "1.1.0")
Attach the package and use:
library("bikm1")
Maintained by
Valerie Robert
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[Scholar Profile | Author Map]
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First Published: 2019-08-24
Latest Update: 2021-07-16
Description:
Co-clustering of the rows and columns of a contingency or binary matrix, or double binary matrices and model selection for the number of row and column clusters. Three models are considered: the Poisson latent block model for contingency matrix, the binary latent block model for binary matrix and a new model we develop: the multiple latent block model for double binary matrices. A new procedure named bikm1 is implemented to investigate more efficiently the grid of numbers of clusters. Then, the studied model selection criteria are the integrated completed likelihood (ICL) and the Bayesian integrated likelihood (BIC). Finally, the co-clustering adjusted Rand index (CARI) to measure agreement between co-clustering partitions is implemented. Robert Valerie, Vasseur Yann, Brault Vincent (2021) .
How to cite:
Valerie Robert (2019). bikm1: Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets. R package version 1.1.0, https://cran.r-project.org/web/packages/bikm1. Accessed 03 Dec. 2024.
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Complete documentation for bikm1
Functions, R codes and Examples using
the bikm1 R package
Some associated functions: ARI-proc . BIKM1_LBM_Binary-class . BIKM1_LBM_Binary-proc . BIKM1_LBM_Poisson-class . BIKM1_LBM_Poisson-proc . BIKM1_MLBM_Binary-class . BIKM1_MLBM_Binary-proc . BinBlocICL_LBM-proc . BinBlocICL_MLBM-proc . BinBlocRnd_LBM-proc . BinBlocRnd_MLBM-proc . BinBlocVisuResum_LBM-proc . BinBlocVisuResum_MLBM-proc . BinBlocVisu_LBM-proc . BinBlocVisu_MLBM-proc . CARI-proc . CE_LBM-proc . CE_MLBM-proc . CE_simple-proc . CoNMI-proc . ENMI-proc . MI_simple-proc . NCE_LBM-proc . NCE_simple-proc . PoissonBlocBIC-proc . PoissonBlocICL-proc . PoissonBlocRnd-proc . PoissonBlocVisu-proc . PoissonBlocVisuResum-proc . bikm1-package . plot-BIKM1_LBM_Binary-method . plot-BIKM1_LBM_Poisson-method . plot-BIKM1_MLBM_Binary-method . print-BIKM1_LBM_Binary-method . print-BIKM1_LBM_Poisson-method . print-BIKM1_MLBM_Binary-method . show-BIKM1_LBM_Binary-method . show-BIKM1_LBM_Poisson-method . show-BIKM1_MLBM_Binary-method . summary-BIKM1_LBM_Binary-method . summary-BIKM1_LBM_Poisson-method . summary-BIKM1_MLBM_Binary-method .
Some associated R codes: BIKM1_LBM_Binary-class.R . BIKM1_LBM_Poisson-class.R . BIKM1_MLBM_Binary-class.R . bikm1-package.R . bikm1_LBM_Binary_functions.R . bikm1_LBM_Poisson_functions.R . bikm1_MLBM_Binary_functions.R . Full bikm1 package functions and examples
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