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bbsBayes
View on CRAN: Click
here
Download and install bbsBayes package within the R console
Install from CRAN:
install.packages("bbsBayes")
Install from Github:
library("remotes")
install_github("cran/bbsBayes") Install by package version:
library("remotes")
install_version("bbsBayes", "2.5.3") Attach the package and use:
library("bbsBayes")
Maintained by
Brandon P.M. Edwards
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-05-27
Latest Update:
Description:
The North American Breeding Bird Survey (BBS) is a long-running
program that seeks to monitor the status and trends of the breeding birds in
North America. Since its start in 1966, the BBS has accumulated over 50 years
of data for over 500 species of North American Birds. Given the temporal and
spatial structure of the data, hierarchical Bayesian models are used to assess
the status and trends of these 500+ species of birds. 'bbsBayes' allows you to perform
hierarchical Bayesian analysis of BBS data. You can run a full
model analysis for one or more species that you choose, or you can take
more control and specify how the data should be stratified, prepared
for 'JAGS', or modelled. The functions provided here allow you to replicate
analyses performed by the United State Geological Survey (USGS, see Link
and Sauer (2011) ) and Canadian Wildlife Service
(CWS, see Smith and Edwards (2020) ).
How to cite:
Brandon P.M. Edwards (2020). bbsBayes: Hierarchical Bayesian Analysis of North American BBS Data. R package version 2.5.3, https://cran.r-project.org/web/packages/bbsBayes. Accessed 05 Jun. 2026.
Previous versions and publish date:
2.2.1 (2020-05-27 12:30), 2.2.2 (2020-05-31 03:40), 2.3.2.2020 (2020-06-27 06:30), 2.3.3.2020 (2020-07-08 19:10), 2.3.4.2020 (2020-10-22 14:50), 2.3.5.2020 (2020-11-26 19:50), 2.3.6.2020 (2021-01-13 11:30), 2.3.7.2020 (2021-06-23 15:50), 2.3.8.2020 (2021-08-06 11:10), 2.4.0.2020 (2022-03-10 23:10), 2.4.1 (2022-04-05 15:52), 2.5.0 (2022-07-11 20:30), 2.5.1 (2022-07-19 09:50), 2.5.2 (2022-10-11 18:22), 2.5.3 (2023-02-27 19:32)
Other packages that cited bbsBayes R package
View bbsBayes citation profile
Other R packages that bbsBayes depends,
imports, suggests or enhances
Functions, R codes and Examples using
the bbsBayes R package
Some associated functions: bbsBayes-deprecated . bird_sample . extract_index_data . fetch_bbs_data . generate_indices . generate_map . generate_trends . geofacet_plot . get_composite_regions . get_final_values . get_mcmc_list . get_prepared_data . get_species_aou . get_strata_area . load_bbs_data . load_map . load_sample_data . lppd . model_to_file . plot_indices . prepare_data . r_hat . route_sample . run_model . species_sample . stratify .
Some associated R codes: bbsBayes-deprecated.R . bbsBayes-package.R . data.R . extract-index-data.R . fetch-bbs-data.R . generate-cont-indices.R . generate-cont-trend.R . generate-indices.R . generate-map.R . generate-regional-indices.R . generate-regional-trends.R . generate-strata-indices.R . generate-strata-trends.R . generate-trends.R . geofacet-plot.R . get-composite-regions.R . get-final-values.R . get-mcmc-list.R . get-prepared-data.R . get-species-aou.R . get-strata-area.R . load-bbs-data.R . load-map.R . load-sample-data.R . lppd.R . model-to-file.R . p-waic.R . plot-cont-indices.R . plot-indices.R . prepare-data.R . prepare-jags-data.R . r-hat.R . run-model.R . stratify.R . waic.R . Full bbsBayes package functions and examples
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