Other packages > Find by keyword >

babelgene  

Gene Orthologs for Model Organisms in a Tidy Data Format
View on CRAN: Click here


Download and install babelgene package within the R console
Install from CRAN:
install.packages("babelgene")

Install from Github:
library("remotes")
install_github("cran/babelgene")

Install by package version:
library("remotes")
install_version("babelgene", "22.9")



Attach the package and use:
library("babelgene")
Maintained by
Igor Dolgalev
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-04-26
Latest Update: 2022-09-29
Description:
Genomic analysis of model organisms frequently requires the use of databases based on human data or making comparisons to patient-derived resources. This requires harmonization of gene names into the same gene space. The 'babelgene' R package converts between human and non-human gene orthologs/homologs. The package integrates orthology assertion predictions sourced from multiple databases as compiled by the HGNC Comparison of Orthology Predictions (HCOP) (Wright et al. 2005 , Eyre et al. 2007 , Seal et al. 2011 ).
How to cite:
Igor Dolgalev (2021). babelgene: Gene Orthologs for Model Organisms in a Tidy Data Format. R package version 22.9, https://cran.r-project.org/web/packages/babelgene. Accessed 05 Aug. 2026.
Previous versions and publish date:
(2026-07-09 07:20), 21.4 (2021-04-26 09:40), 22.3 (2022-03-30 18:30)
Other packages that cited babelgene R package
View babelgene citation profile
Other R packages that babelgene depends, imports, suggests or enhances
Complete documentation for babelgene
Functions, R codes and Examples using the babelgene R package
Some associated functions: orthologs . species . 
Some associated R codes: functions.R .  Full babelgene package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

kernelPSI  
Post-Selection Inference for Nonlinear Variable Selection
Different post-selection inference strategies for kernelselection as described in kernelPSI a Post-S ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
dhReg  
Dynamic Harmonic Regression
Building and forecasting time series data with multiple seasonality using Dynamic Harmonic Regressio ...
Download / Learn more Package Citations See dependency  
dcov  
A Fast Implementation of Distance Covariance
Efficient methods for computing distance covariance and relevant statistics. See Sz ...
Download / Learn more Package Citations See dependency  
noisyr  
Noise Quantification in High Throughput Sequencing Output
Quantifies and removes technical noise from high-throughput sequencing data. Two approaches are use ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA