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apLCMS
View on CRAN: Click
here
Download and install apLCMS package within the R console
Install from CRAN:
install.packages("apLCMS")
Install from Github:
library("remotes")
install_github("cran/apLCMS") Install by package version:
library("remotes")
install_version("apLCMS", "6.8.3") Attach the package and use:
library("apLCMS")
Maintained by
Tianwei Yu
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-09-02
Latest Update: 2025-09-02
Description:
Provides methods for the processing of liquid chromatography-mass spectrometry (LC/MS) based metabolomics data, including adaptive tolerance level searching, non-parametric intensity grouping, the use of run filter to preserve weak signals, model-based estimation of peak intensities, and peak detection based on existing knowledge. Related references include Yu et al. (2009) <doi:10.1093/bioinformatics/btp291>, Liu et al. (2020) <doi:10.1038/s41598-020-70850-0>, Yu et al. (2014) <doi:10.1093/bioinformatics/btu430>, Yu et al. (2013) <doi:10.1021/pr301053d>.
How to cite:
Tianwei Yu (2025). apLCMS: Adaptive Processing of LC-MS Data. R package version 6.8.3, https://cran.r-project.org/web/packages/apLCMS. Accessed 25 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:18), 6.8.3 (2025-08-19 16:30)
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