Other packages > Find by keyword >

apLCMS  

Adaptive Processing of LC-MS Data
View on CRAN: Click here


Download and install apLCMS package within the R console
Install from CRAN:
install.packages("apLCMS")

Install from Github:
library("remotes")
install_github("cran/apLCMS")

Install by package version:
library("remotes")
install_version("apLCMS", "6.8.3")



Attach the package and use:
library("apLCMS")
Maintained by
Tianwei Yu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-09-02
Latest Update: 2025-09-02
Description:
Provides methods for the processing of liquid chromatography-mass spectrometry (LC/MS) based metabolomics data, including adaptive tolerance level searching, non-parametric intensity grouping, the use of run filter to preserve weak signals, model-based estimation of peak intensities, and peak detection based on existing knowledge. Related references include Yu et al. (2009) <doi:10.1093/bioinformatics/btp291>, Liu et al. (2020) <doi:10.1038/s41598-020-70850-0>, Yu et al. (2014) <doi:10.1093/bioinformatics/btu430>, Yu et al. (2013) <doi:10.1021/pr301053d>.
How to cite:
Tianwei Yu (2025). apLCMS: Adaptive Processing of LC-MS Data. R package version 6.8.3, https://cran.r-project.org/web/packages/apLCMS. Accessed 25 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:18), 6.8.3 (2025-08-19 16:30)
Other packages that cited apLCMS R package
View apLCMS citation profile
Other R packages that apLCMS depends, imports, suggests or enhances
Complete documentation for apLCMS
Functions, R codes and Examples using the apLCMS R package
Full apLCMS package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

imputeTS  
Time Series Missing Value Imputation
Imputation (replacement) of missing values in univariate time series. Offers several imputation fu ...
Download / Learn more Package Citations See dependency  
CTT  
Classical Test Theory Functions
A collection of common test and item analyses from a classical test theory (CTT) framework. Analyses ...
Download / Learn more Package Citations See dependency  
RcmdrPlugin.aRnova  
R Commander Plug-in for Repeated-Measures ANOVA
R Commander plug-in for repeated-measures and mixed-design ('split-plot') ANOVA. It adds a new men ...
Download / Learn more Package Citations See dependency  
nlstools  
Tools for Nonlinear Regression Analysis
Several tools for assessing the quality of fit of a gaussian nonlinear model are provided. ...
Download / Learn more Package Citations See dependency  
guardianapi  
Access 'The Guardian' Newspaper Open Data API
Access to 'The Guardian' newspaper's open API , containing ...
Download / Learn more Package Citations See dependency  
fstcore  
R Bindings to the 'Fstlib' Library
The 'fstlib' library provides multithreaded serialization of compressed data frames using the 'fst' ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA