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anovir  

Analysis of Virulence
View on CRAN: Click here


Download and install anovir package within the R console
Install from CRAN:
install.packages("anovir")

Install from Github:
library("remotes")
install_github("cran/anovir")

Install by package version:
library("remotes")
install_version("anovir", "0.1.0")



Attach the package and use:
library("anovir")
Maintained by
Philip Agnew
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-10-24
Latest Update: 2020-10-24
Description:
Epidemiological population dynamics models traditionally define a pathogen's virulence as the increase in the per capita rate of mortality of infected hosts due to infection. This package provides functions allowing virulence to be estimated by maximum likelihood techniques. The approach is based on the analysis of relative survival comparing survival in matching cohorts of infected vs. uninfected hosts (Agnew 2019) .
How to cite:
Philip Agnew (2020). anovir: Analysis of Virulence. R package version 0.1.0, https://cran.r-project.org/web/packages/anovir. Accessed 12 Oct. 2026.
Previous versions and publish date:
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Complete documentation for anovir
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