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anndata  

'anndata' for R
View on CRAN: Click here


Download and install anndata package within the R console
Install from CRAN:
install.packages("anndata")

Install from Github:
library("remotes")
install_github("cran/anndata")

Install by package version:
library("remotes")
install_version("anndata", "0.8.0")



Attach the package and use:
library("anndata")
Maintained by
Robrecht Cannoodt
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-11-04
Latest Update: 2025-05-27
Description:
A 'reticulate' wrapper for the Python package 'anndata'. Provides a scalable way of keeping track of data and learned annotations. Used to read from and write to the h5ad file format.
How to cite:
Robrecht Cannoodt (2020). anndata: 'anndata' for R. R package version 0.8.0, https://cran.r-project.org/web/packages/anndata. Accessed 25 Jun. 2026.
Previous versions and publish date:
0.7.4 (2020-11-04 16:30), 0.7.5.1 (2021-02-02 22:20), 0.7.5.2 (2021-03-28 12:50), 0.7.5.3 (2021-09-10 11:30), 0.7.5.4 (2022-08-23 23:40), 0.7.5.5 (2022-09-23 09:10), 0.7.5.6 (2023-03-17 15:50), 0.7.5 (2020-11-19 14:50)
Other packages that cited anndata R package
View anndata citation profile
Other R packages that anndata depends, imports, suggests or enhances
Complete documentation for anndata
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