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allelematch  

Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present
View on CRAN: Click here


Download and install allelematch package within the R console
Install from CRAN:
install.packages("allelematch")

Install from Github:
library("remotes")
install_github("cran/allelematch")

Install by package version:
library("remotes")
install_version("allelematch", "2.5.4")



Attach the package and use:
library("allelematch")
Maintained by
Todd Cross
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2011-10-08
Latest Update: 2023-08-24
Description:
Tools for the identification of unique of multilocus genotypes when both genotyping error and missing data may be present; targeted for use with large datasets and databases containing multiple samples of each individual (a common situation in conservation genetics, particularly in non-invasive wildlife sampling applications). Functions explicitly incorporate missing data and can tolerate allele mismatches created by genotyping error. If you use this package, please cite the original publication in Molecular Ecology Resources (Galpern et al., 2012), the details for which can be generated using citation('allelematch'). For a complete vignette, please access via the Data S1 Supplementary documentation and tutorials (PDF) located at .
How to cite:
Todd Cross (2011). allelematch: Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present. R package version 2.5.4, https://cran.r-project.org/web/packages/allelematch. Accessed 21 Nov. 2024.
Previous versions and publish date:
2.0 (2011-10-08 08:43), 2.01 (2012-01-11 19:35), 2.02 (2012-02-21 21:04), 2.03 (2013-01-14 18:29), 2.5.1 (2019-04-15 23:22), 2.5.2 (2023-05-19 02:00), 2.5.3 (2023-08-24 16:30), 2.5 (2014-09-19 00:14)
Other packages that cited allelematch R package
View allelematch citation profile
Other R packages that allelematch depends, imports, suggests or enhances
Complete documentation for allelematch
Functions, R codes and Examples using the allelematch R package
Some associated functions: allelematch-package . amAlleleFreq . amCSSForHTML . amCluster . amDataset . amExampleData . amMatrix . amPairwise . amUnique . amUniqueProfile . 
Some associated R codes: Full allelematch package functions and examples
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