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adwave  

Wavelet Analysis of Genomic Data from Admixed Populations
View on CRAN: Click here


Download and install adwave package within the R console
Install from CRAN:
install.packages("adwave")

Install from Github:
library("remotes")
install_github("cran/adwave")

Install by package version:
library("remotes")
install_version("adwave", "1.3")



Attach the package and use:
library("adwave")
Maintained by
Murray Cox
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-10-10
Latest Update: 2018-05-17
Description:
Implements wavelet-based approaches for describing population admixture. Principal Components Analysis (PCA) is used to define the population structure and produce a localized admixture signal for each individual. Wavelet summaries of the PCA output describe variation present in the data and can be related to population-level demographic processes. For more details, see J Sanderson, H Sudoyo, TM Karafet, MF Hammer and MP Cox. 2015. Reconstructing past admixture processes from local genomic ancestry using wavelet transformation. Genetics 200:469-481 .
How to cite:
Murray Cox (2014). adwave: Wavelet Analysis of Genomic Data from Admixed Populations. R package version 1.3, https://cran.r-project.org/web/packages/adwave. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0 (2014-10-10 21:54), 1.1 (2015-06-25 05:32), 1.2 (2017-09-15 00:52)
Other packages that cited adwave R package
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Complete documentation for adwave
Functions, R codes and Examples using the adwave R package
Some associated functions: admix . plotsignal . signal . wavesum . 
Some associated R codes: plotsignal.R . signal.R . wavesum.R .  Full adwave package functions and examples
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