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adephylo  

Exploratory Analyses for the Phylogenetic Comparative Method
View on CRAN: Click here


Download and install adephylo package within the R console
Install from CRAN:
install.packages("adephylo")

Install from Github:
library("remotes")
install_github("cran/adephylo")

Install by package version:
library("remotes")
install_version("adephylo", "1.1-17")



Attach the package and use:
library("adephylo")
Maintained by
Aurélie Siberchicot
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2009-11-05
Latest Update: 2025-03-14
Description:
Multivariate tools to analyze comparative data, i.e. a phylogeny and some traits measured for each taxa. The package contains functions to represent comparative data, compute phylogenetic proximities, perform multivariate analysis with phylogenetic constraints and test for the presence of phylogenetic autocorrelation. The package is described in Jombart et al (2010) .
How to cite:
Aurélie Siberchicot (2009). adephylo: Exploratory Analyses for the Phylogenetic Comparative Method. R package version 1.1-17, https://cran.r-project.org/web/packages/adephylo. Accessed 06 Aug. 2026.
Previous versions and publish date:
(2026-07-09 07:17), 1.0-1 (2009-11-05 21:05), 1.0-2 (2010-01-12 17:13), 1.1-0 (2010-04-05 17:45), 1.1-1 (2011-01-17 20:20), 1.1-2 (2011-11-07 15:03), 1.1-3 (2012-10-31 14:26), 1.1-4 (2013-05-22 14:51), 1.1-5 (2013-08-10 13:51), 1.1-6 (2013-11-30 10:11), 1.1-10 (2016-12-13 07:57), 1.1-11 (2017-12-18 17:33), 1.1-13 (2022-10-19 15:45), 1.1-16 (2023-10-06 18:20)
Other packages that cited adephylo R package
View adephylo citation profile
Other R packages that adephylo depends, imports, suggests or enhances
Complete documentation for adephylo
Functions, R codes and Examples using the adephylo R package
Some associated functions: abouheif . adephylo-package . bullseye . carni19 . carni70 . dibas . distRoot . distTips . listDD . listTips . lizards . maples . miscUtils . mjrochet . moranIdx . orthobasis . orthogram . palm . ppca . procella . proxTips . sp.tips . table.phylo4d . tithonia . treePart . ungulates . 
Some associated R codes: abouheif.R . adephylo-package.R . bullseye.R . dibas.R . distances.R . moran.R . orthobasis.R . orthogram.R . partition.R . ppca.R . proximities.R . table.phylo4d.R . utils.R . zzz.R .  Full adephylo package functions and examples
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