Other packages > Find by keyword >

activityGCMM  

Circular Mixed Effect Mixture Models of Animal Activity Patterns
View on CRAN: Click here


Download and install activityGCMM package within the R console
Install from CRAN:
install.packages("activityGCMM")

Install from Github:
library("remotes")
install_github("cran/activityGCMM")

Install by package version:
library("remotes")
install_version("activityGCMM", "1.1.1")



Attach the package and use:
library("activityGCMM")
Maintained by
Liz AD Campbell
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-03-15
Latest Update: 2021-06-14
Description:
Bayesian parametric generalized circular mixed effect mixture models (GCMMs) for estimating animal activity patterns from camera trap data and other nested data structures using 'JAGS', including automatic Bayesian k-cluster selection and random circular intercepts for nested data. The GCMM function automatically selects the number of components for the mixture model (supporting up to 4 mixture components) based on a Bayesian linear finite normal mixture model and fits a Bayesian parametric circular mixed effect mixture model with one or two random effects as random circular intercepts with a a von Mises or wrapped Cauchy distribution. Provides graphs of the combined mixture model or separate mixture components. Functionality is provided to allow quantitative comparisons between model parameters. See Campbell et al. (in press) It's time to expand our analyses of animal activity; Campbell et al. (in press) Temporal and microspatial niche partitioning; Campbell et al. (in press) A novel approach to comparing animal activity patterns. News, updates, and tutorials will be available on www.atlasgoldenwolf.org/stats and www.github.com/LizADCampbell .
How to cite:
Liz AD Campbell (2021). activityGCMM: Circular Mixed Effect Mixture Models of Animal Activity Patterns. R package version 1.1.1, https://cran.r-project.org/web/packages/activityGCMM. Accessed 18 Feb. 2025.
Previous versions and publish date:
1.0.0 (2021-03-15 09:50), 1.1.1 (2021-06-14 21:20)
Other packages that cited activityGCMM R package
View activityGCMM citation profile
Other R packages that activityGCMM depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

OptGS  
Near-Optimal Group-Sequential Designs for Continuous Outcomes
Optimal group-sequential designs minimise some function of the expected and maximum sample size whil ...
Download / Learn more Package Citations See dependency  
MOSS  
Multi-Omic Integration via Sparse Singular Value Decomposition
High dimensionality, noise and heterogeneity among samples and features challenge the omic integrat ...
Download / Learn more Package Citations See dependency  
fclust  
Fuzzy Clustering
Algorithms for fuzzy clustering, cluster validity indices and plots for cluster validity and visuali ...
Download / Learn more Package Citations See dependency  
ppmf  
Read Census Privacy Protected Microdata Files
Implements data processing described in to align modern differentially ...
Download / Learn more Package Citations See dependency  
clustMixType  
k-Prototypes Clustering for Mixed Variable-Type Data
Functions to perform k-prototypes partitioning clustering for mixed variable-type data according to ...
Download / Learn more Package Citations See dependency  
readxlsb  
Read 'Excel' Binary (.xlsb) Workbooks
Import data from 'Excel' binary (.xlsb) workbooks into R. ...
Download / Learn more Package Citations See dependency  

23,712

R Packages

205,795

Dependencies

64,332

Author Associations

23,631

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA