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acoRn  

Exclusion-Based Parentage Assignment Using Multilocus Genotype Data
View on CRAN: Click here


Download and install acoRn package within the R console
Install from CRAN:
install.packages("acoRn")

Install from Github:
library("remotes")
install_github("cran/acoRn")

Install by package version:
library("remotes")
install_version("acoRn", "0.1.0")



Attach the package and use:
library("acoRn")
Maintained by
Nikos Pechlivanis
[Scholar Profile | Author Map]
First Published: 2024-10-02
Latest Update: 2024-10-02
Description:
Exclusion-based parentage assignment is essential for studies in biodiversity conservation and breeding programs - Kang Huang, Rui Mi, Derek W Dunn, Tongcheng Wang, Baoguo Li, (2018), <doi:10.1534/genetics.118.301592>. The tool compares multilocus genotype data of potential parents and offspring, identifying likely parentage relationships while accounting for genotyping errors, missing data, and duplicate genotypes. 'acoRn' includes two algorithms: one generates synthetic genotype data based on user-defined parameters, while the other analyzes existing genotype data to identify parentage patterns. The package is versatile, applicable to diverse organisms, and offers clear visual outputs, making it a valuable resource for researchers.
How to cite:
Nikos Pechlivanis (2024). acoRn: Exclusion-Based Parentage Assignment Using Multilocus Genotype Data. R package version 0.1.0, https://cran.r-project.org/web/packages/acoRn. Accessed 21 Feb. 2025.
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