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WormTensor  

A Clustering Method for Time-Series Whole-Brain Activity Data of 'C. elegans'
View on CRAN: Click here


Download and install WormTensor package within the R console
Install from CRAN:
install.packages("WormTensor")

Install from Github:
library("remotes")
install_github("cran/WormTensor")

Install by package version:
library("remotes")
install_version("WormTensor", "0.1.2")



Attach the package and use:
library("WormTensor")
Maintained by
Kentaro Yamamoto
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-09-08
Latest Update: 2025-07-21
Description:
A toolkit to detect clusters from distance matrices. The distance matrices are assumed to be calculated between the cells of multiple animals ('Caenorhabditis elegans') from input time-series matrices. Some functions for generating distance matrices, performing clustering, evaluating the clustering, and visualizing the results of clustering and evaluation are available. We're also providing the download function to retrieve the calculated distance matrices from 'figshare' <https://figshare.com>.
How to cite:
Kentaro Yamamoto (2022). WormTensor: A Clustering Method for Time-Series Whole-Brain Activity Data of 'C. elegans'. R package version 0.1.2, https://cran.r-project.org/web/packages/WormTensor. Accessed 26 Jun. 2026.
Previous versions and publish date:
0.1.0 (2022-09-08 11:23), 0.1.1 (2024-07-23 11:10)
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Complete documentation for WormTensor
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