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VertexSort  

Network Hierarchical Structure and Randomization
View on CRAN: Click here


Download and install VertexSort package within the R console
Install from CRAN:
install.packages("VertexSort")

Install from Github:
library("remotes")
install_github("cran/VertexSort")

Install by package version:
library("remotes")
install_version("VertexSort", "0.1-1")



Attach the package and use:
library("VertexSort")
Maintained by
Diala Abd-Rabbo
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-03-04
Latest Update:
Description:
Permits to apply the 'Vertex Sort' algorithm (Jothi et al. (2009) <10.1038/msb.2009.52>) to a graph in order to elucidate its hierarchical structure. It also allows graphic visualization of the sorted graph by exporting the results to a cytoscape friendly format. Moreover, it offers five different algorithms of graph randomization: 1) Randomize a graph with preserving node degrees, 2) with preserving similar node degrees, 3) without preserving node degrees, 4) with preserving node in-degrees and 5) with preserving node out-degrees.
How to cite:
Diala Abd-Rabbo (2017). VertexSort: Network Hierarchical Structure and Randomization. R package version 0.1-1, https://cran.r-project.org/web/packages/VertexSort. Accessed 29 Oct. 2026.
Previous versions and publish date:
(2026-07-09 08:29), 0.1-0 (2017-03-04 08:21), 0.1-1 (2017-03-09 08:34)
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