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VDJgermlines  

Variable, Diversity and Joining Sequences from Various Species
View on CRAN: Click here


Download and install VDJgermlines package within the R console
Install from CRAN:
install.packages("VDJgermlines")

Install from Github:
library("remotes")
install_github("cran/VDJgermlines")

Install by package version:
library("remotes")
install_version("VDJgermlines", "0.1")



Attach the package and use:
library("VDJgermlines")
Maintained by
Alexander Yermanos
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-12-18
Latest Update: 2018-12-18
Description:
Contains variable, diversity, and joining sequences and accompanying functions that enable both the extraction of and comparison between immune V-D-J genomic segments from a variety of species. Sources include IMGT from MP Lefranc (2009) <doi:10.1093/nar/gkn838> and Vgenerepertoire from publication DN Olivieri (2014) <doi:10.1007/s00251-014-0784-3>.
How to cite:
Alexander Yermanos (2018). VDJgermlines: Variable, Diversity and Joining Sequences from Various Species. R package version 0.1, https://cran.r-project.org/web/packages/VDJgermlines. Accessed 07 Nov. 2024.
Previous versions and publish date:
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Other R packages that VDJgermlines depends, imports, suggests or enhances
Complete documentation for VDJgermlines
Functions, R codes and Examples using the VDJgermlines R package
Some associated functions: VDJgermlines . VDJheatmap . VDJphylo . extractSequencesR . 
Some associated R codes: VDJheatmap.R . VDJphylo.R . data.R . extractSequencesR.R .  Full VDJgermlines package functions and examples
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