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VDAP
View on CRAN: Click
here
Download and install VDAP package within the R console
Install from CRAN:
install.packages("VDAP")
Install from Github:
library("remotes")
install_github("cran/VDAP")
Install by package version:
library("remotes")
install_version("VDAP", "2.0.0")
Attach the package and use:
library("VDAP")
Maintained by
Cody Moore
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-05-22
Latest Update: 2016-05-22
Description:
Analyze Peptide Array Data and characterize peptide sequence space. Allows for high level visualization of global signal, Quality control based on replicate correlation and/or relative Kd, calculation of peptide Length/Charge/Kd parameters, Hits selection based on RFU Signal, and amino acid composition/basic motif recognition with RFU signal weighting. Basic signal trends can be used to generate peptides that follow the observed compositional trends.
How to cite:
Cody Moore (2016). VDAP: Peptide Array Analysis Tools. R package version 2.0.0, https://cran.r-project.org/web/packages/VDAP
Previous versions and publish date:
No previous versions
Other packages that cited VDAP R package
View VDAP citation profile
Other R packages that VDAP depends,
imports, suggests or enhances
Functions, R codes and Examples using
the VDAP R package
Some associated functions: Attrib . Dups . KdA . QCKd . QCon . aaDist . aaStruct . genPep . hitSel . lcScan . resSep . vComp . vFormat . vMotif . vSep .
Some associated R codes: MPepGen0.0.1.R . Motifs_0.2.0.R . QCKd_hitSel_0.1.0.R . aaDist_0.1.0.R . genPep_0.1.0.R . lcScan_1.2.8.R . resSep_0.2.0.R . vFormat_0.1.0.R . vSep_0.1.0.R . Full VDAP package functions and examples
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