Other packages > Find by keyword >

VCA  

Variance Component Analysis
View on CRAN: Click here


Download and install VCA package within the R console
Install from CRAN:
install.packages("VCA")

Install from Github:
library("remotes")
install_github("cran/VCA")

Install by package version:
library("remotes")
install_version("VCA", "1.5.1")



Attach the package and use:
library("VCA")
Maintained by
Andre Schuetzenmeister
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-03-16
Latest Update: 2024-01-18
Description:
ANOVA and REML estimation of linear mixed models is implemented, once following Searle et al. (1991, ANOVA for unbalanced data), once making use of the 'lme4' package. The primary objective of this package is to perform a variance component analysis (VCA) according to CLSI EP05-A3 guideline "Evaluation of Precision of Quantitative Measurement Procedures" (2014). There are plotting methods for visualization of an experimental design, plotting random effects and residuals. For ANOVA type estimation two methods for computing ANOVA mean squares are implemented (SWEEP and quadratic forms). The covariance matrix of variance components can be derived, which is used in estimating confidence intervals. Linear hypotheses of fixed effects and LS means can be computed. LS means can be computed at specific values of covariables and with custom weighting schemes for factor variables. See ?VCA for a more comprehensive description of the features.
How to cite:
Andre Schuetzenmeister (2015). VCA: Variance Component Analysis. R package version 1.5.1, https://cran.r-project.org/web/packages/VCA. Accessed 30 Jan. 2025.
Previous versions and publish date:
1.1.1 (2015-04-27 09:03), 1.1 (2015-03-16 10:29), 1.2.1 (2015-11-24 15:16), 1.2 (2015-07-20 18:08), 1.3.1 (2016-04-04 13:38), 1.3.2 (2016-07-25 20:30), 1.3.3 (2017-07-12 14:52), 1.3.4 (2018-07-18 14:20), 1.3 (2016-03-23 23:41), 1.4.0 (2019-07-10 18:32), 1.4.1 (2019-11-14 23:40), 1.4.2 (2019-12-17 17:20), 1.4.3 (2020-06-17 11:50), 1.4.4 (2022-08-31 20:20), 1.4.5 (2022-09-07 11:30), 1.4.6 (2024-01-17 10:22), 1.5.0 (2024-01-18 13:00)
Other packages that cited VCA R package
View VCA citation profile
Other R packages that VCA depends, imports, suggests or enhances
Complete documentation for VCA
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

GGMncv  
Gaussian Graphical Models with Nonconvex Regularization
Estimate Gaussian graphical models with nonconvex penalties , including ...
Download / Learn more Package Citations See dependency  
kesernetwork  
Visualization of the KESER Network
A shiny app to visualize the knowledge networks for the code concepts. Using co-occurrence matrices ...
Download / Learn more Package Citations See dependency  
convertid  
Convert Gene IDs Between Each Other and Fetch Annotations from Biomart
Gene Symbols or Ensembl Gene IDs are converted using the Bimap interface in 'AnnotationDbi' in conve ...
Download / Learn more Package Citations See dependency  
cinaR  
A Computational Pipeline for Bulk 'ATAC-Seq' Profiles
Differential analyses and Enrichment pipeline for bulk 'ATAC-seq' data analyses. This package combi ...
Download / Learn more Package Citations See dependency  
fastmit  
Fast Mutual Information Based Independence Test
A mutual information estimator based on k-nearest neighbor method proposed by A. Kraskov, et al. (20 ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

23,580

R Packages

204,057

Dependencies

63,980

Author Associations

23,581

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA