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UKBAnalytica  

UK Biobank Data Processing and Survival Analysis Toolkit
View on CRAN: Click here


Download and install UKBAnalytica package within the R console
Install from CRAN:
install.packages("UKBAnalytica")

Install from Github:
library("remotes")
install_github("cran/UKBAnalytica")

Install by package version:
library("remotes")
install_version("UKBAnalytica", "1.0.0")



Attach the package and use:
library("UKBAnalytica")
Maintained by
Nan He
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-06-30
Latest Update: 2026-06-30
Description:
Provides an integrated workflow for UK Biobank Research Analysis Platform (RAP) hosted and RAP-generated analysis tables. The package supports RAP phenotype extraction planning, predefined variable sets and disease definitions, standardized baseline preprocessing, multi-source endpoint ascertainment, prevalent and incident case classification, survival-ready cohort construction, regression, multiple imputation, propensity score analysis, mediation analysis, subgroup and sensitivity analyses, machine learning, proteomics enrichment and protein-protein interaction analysis, and publication-oriented visualization. The package workflow is described in He et al. (2026) <doi:10.64898/2026.06.19.26356057>.
How to cite:
Nan He (2026). UKBAnalytica: UK Biobank Data Processing and Survival Analysis Toolkit. R package version 1.0.0, https://cran.r-project.org/web/packages/UKBAnalytica. Accessed 08 Oct. 2026.
Previous versions and publish date:
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Complete documentation for UKBAnalytica
Functions, R codes and Examples using the UKBAnalytica R package
Full UKBAnalytica package functions and examples
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