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UCSCXenaTools  

Download and Explore Datasets from UCSC Xena Data Hubs
View on CRAN: Click here


Download and install UCSCXenaTools package within the R console
Install from CRAN:
install.packages("UCSCXenaTools")

Install from Github:
library("remotes")
install_github("cran/UCSCXenaTools")

Install by package version:
library("remotes")
install_version("UCSCXenaTools", "1.6.1")



Attach the package and use:
library("UCSCXenaTools")
Maintained by
Shixiang Wang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-08-17
Latest Update: 2022-06-20
Description:
Download and explore datasets from UCSC Xena data hubs, which are a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.Databases are normalized so they can be combined, linked, filtered, explored and downloaded.
How to cite:
Shixiang Wang (2018). UCSCXenaTools: Download and Explore Datasets from UCSC Xena Data Hubs. R package version 1.6.1, https://cran.r-project.org/web/packages/UCSCXenaTools. Accessed 25 Aug. 2026.
Previous versions and publish date:
(2026-07-09 08:28), 0.2.1 (2018-08-17 11:20), 0.2.2 (2018-08-19 18:00), 0.2.4 (2018-09-12 11:20), 0.2.5 (2018-10-13 10:00), 0.2.6 (2018-12-09 06:30), 0.2.7 (2019-01-22 06:20), 1.0.0 (2019-02-26 10:10), 1.0.1 (2019-03-07 06:22), 1.1.0 (2019-03-29 11:50), 1.2.0 (2019-03-31 16:10), 1.2.1 (2019-04-18 12:00), 1.2.2 (2019-06-06 10:12), 1.2.3 (2019-06-21 10:30), 1.2.4 (2019-07-22 00:50), 1.2.5 (2019-08-02 17:00), 1.2.6 (2019-09-07 17:30), 1.2.7 (2019-10-09 06:30), 1.2.8 (2019-11-17 18:40), 1.2.9 (2019-11-25 11:00), 1.2.10 (2019-12-13 14:00), 1.3.0 (2020-02-26 20:00), 1.3.1 (2020-03-18 10:30), 1.3.2 (2020-07-14 11:10), 1.3.3 (2020-08-05 18:50), 1.3.4 (2020-09-30 22:00), 1.3.5 (2020-11-14 18:40), 1.3.6 (2020-11-23 10:30), 1.4.0 (2021-01-19 17:30), 1.4.2 (2021-03-09 15:00), 1.4.3 (2021-03-22 09:20), 1.4.4 (2021-04-06 18:20), 1.4.5 (2021-05-27 07:00), 1.4.6 (2021-07-17 11:10), 1.4.7 (2021-09-15 13:50), 1.4.8 (2022-06-20 10:10), 1.6.1 (2025-08-21 12:00)
Other packages that cited UCSCXenaTools R package
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Complete documentation for UCSCXenaTools
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