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TestNet  

A Method for Inferring Microbial Networks with FDR Control
View on CRAN: Click here


Download and install TestNet package within the R console
Install from CRAN:
install.packages("TestNet")

Install from Github:
library("remotes")
install_github("cran/TestNet")

Install by package version:
library("remotes")
install_version("TestNet", "1.0")



Attach the package and use:
library("TestNet")
Maintained by
Yi-Juan Hu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-06-02
Latest Update: 2026-06-02
Description:
A testing method for inferring microbial networks. It differs from existing microbial network analyses in that it provides calibrated results by controlling the false discovery rate. The method accounts for the complex features of taxa count data. It also accommodates both independent and clustered samples, offers separate linear and nonlinear tests for each pair of taxa, and includes an omnibus test that bypasses the need to specify the type of relationship for each pair of taxa.
How to cite:
Yi-Juan Hu (2026). TestNet: A Method for Inferring Microbial Networks with FDR Control. R package version 1.0, https://cran.r-project.org/web/packages/TestNet. Accessed 18 Jul. 2026.
Previous versions and publish date:
No previous versions
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Complete documentation for TestNet
Functions, R codes and Examples using the TestNet R package
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