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TESS
View on CRAN: Click
here
Download and install TESS package within the R console
Install from CRAN:
install.packages("TESS")
Install from Github:
library("remotes")
install_github("cran/TESS")
Install by package version:
library("remotes")
install_version("TESS", "2.1.2")
Attach the package and use:
library("TESS")
Maintained by
Sebastian Hoehna
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2012-10-10
Latest Update: 2022-04-25
Description:
Simulation of reconstructed phylogenetic trees under tree-wide time-heterogeneous birth-death processes and estimation of diversification parameters under the same model. Speciation and extinction rates can be any function of time and mass-extinction events at specific times can be provided. Trees can be simulated either conditioned on the number of species, the time of the process, or both. Additionally, the likelihood equations are implemented for convenience and can be used for Maximum Likelihood (ML) estimation and Bayesian inference.
How to cite:
Sebastian Hoehna (2012). TESS: Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events. R package version 2.1.2, https://cran.r-project.org/web/packages/TESS. Accessed 29 Apr. 2025.
Previous versions and publish date:
Other packages that cited TESS R package
View TESS citation profile
Other R packages that TESS depends,
imports, suggests or enhances
Complete documentation for TESS
Functions, R codes and Examples using
the TESS R package
Some associated functions: TESS-package . cettiidae . conifers . mammalia . tess.PosteriorPrediction . tess.PosteriorPredictiveTest . tess.analysis . tess.likelihood . tess.likelihood.rateshift . tess.mcmc . tess.nTaxa.expected . tess.pathSampling . tess.plot.multichain.diagnostics . tess.plot.output . tess.plot.singlechain.diagnostics . tess.process.output . tess.sim.age . tess.sim.taxa.age . tess.sim.taxa . tess.steppingStoneSampling .
Some associated R codes: RcppExports.R . tess.PathSampling.R . tess.PosteriorPrediction.R . tess.PosteriorPredictiveTest.R . tess.SteppingStoneSampling.R . tess.analysis.R . tess.equations.R . tess.likelihood.R . tess.likelihood.rateshift.R . tess.mcmc.R . tess.nTaxa.expected.R . tess.plot.multichain.diagnostics.R . tess.plot.output.R . tess.plot.singlechain.diagnostics.R . tess.process.output.R . tess.sim.age.R . tess.sim.taxa.R . tess.sim.taxa.age.R . tess.utilities.R . Full TESS package functions and examples
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