Other packages > Find by keyword >

TESS  

Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events
View on CRAN: Click here


Download and install TESS package within the R console
Install from CRAN:
install.packages("TESS")

Install from Github:
library("remotes")
install_github("cran/TESS")

Install by package version:
library("remotes")
install_version("TESS", "2.1.2")



Attach the package and use:
library("TESS")
Maintained by
Sebastian Hoehna
[Scholar Profile | Author Map]
First Published: 2012-10-10
Latest Update: 2022-04-25
Description:
Simulation of reconstructed phylogenetic trees under tree-wide time-heterogeneous birth-death processes and estimation of diversification parameters under the same model. Speciation and extinction rates can be any function of time and mass-extinction events at specific times can be provided. Trees can be simulated either conditioned on the number of species, the time of the process, or both. Additionally, the likelihood equations are implemented for convenience and can be used for Maximum Likelihood (ML) estimation and Bayesian inference.
How to cite:
Sebastian Hoehna (2012). TESS: Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events. R package version 2.1.2, https://cran.r-project.org/web/packages/TESS. Accessed 29 Apr. 2025.
Previous versions and publish date:
1.0.0 (2012-10-10 11:35), 1.1.0 (2013-01-30 16:50), 1.2.0 (2013-03-21 22:48), 1.2.1 (2013-04-22 18:06), 2.0.0 (2015-06-18 08:44), 2.1.0 (2015-10-28 08:44), 2.1.1 (2022-01-14 15:42)
Other packages that cited TESS R package
View TESS citation profile
Other R packages that TESS depends, imports, suggests or enhances
Complete documentation for TESS
Downloads during the last 30 days
03/3003/3104/0104/0204/0304/0404/0504/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/28Downloads for TESS51015202530TrendBars

Today's Hot Picks in Authors and Packages

bigGP  
Distributed Gaussian Process Calculations
Distributes Gaussian process calculations across nodes in a distributed memory setting, using Rmpi. ...
Download / Learn more Package Citations See dependency  
phecodemap  
Visualization for PheCode Mapping with ICD-9 and ICD-10-CM Codes
To build a shiny app for visualization of the hierarchy of PheCode Mapping with International Classi ...
Download / Learn more Package Citations See dependency  
knockoff  
The Knockoff Filter for Controlled Variable Selection
The knockoff filter is a general procedure for controlling the false discovery rate (FDR) when perf ...
Download / Learn more Package Citations See dependency  
PCAmatchR  
Match Cases to Controls Based on Genotype Principal Components
Matches cases to controls based on genotype principal components (PC). In order to produce better r ...
Download / Learn more Package Citations See dependency  
NBBDesigns  
Neighbour Balanced Block Designs (NBBDesigns)
Neighbour-balanced designs ensure that no treatment is disadvantaged unfairly by its surroundings. T ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

24,142

R Packages

207,311

Dependencies

65,176

Author Associations

24,143

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA