Other packages > Find by keyword >

TDA  

Statistical Tools for Topological Data Analysis
View on CRAN: Click here


Download and install TDA package within the R console
Install from CRAN:
install.packages("TDA")

Install from Github:
library("remotes")
install_github("cran/TDA")

Install by package version:
library("remotes")
install_version("TDA", "1.9.4")



Attach the package and use:
library("TDA")
Maintained by
Jisu Kim
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-03-11
Latest Update: 2025-02-02
Description:
Tools for the statistical analysis of persistent homology and for density clustering. For that, this package provides an R interface for the efficient algorithms of the C++ libraries 'GUDHI' <https://project.inria.fr/gudhi/software/>, 'Dionysus' <https://www.mrzv.org/software/dionysus/>, and 'PHAT' <https://bitbucket.org/phat-code/phat/>. This package also implements the methods in Fasy et al. (2014) <doi:10.1214/14-AOS1252> and Chazal et al. (2014) <doi:10.1145/2582112.2582128>for analyzing the statistical significance of persistent homology features.
How to cite:
Jisu Kim (2021). TDA: Statistical Tools for Topological Data Analysis. R package version 1.9.4, https://cran.r-project.org/web/packages/TDA. Accessed 08 Oct. 2026.
Previous versions and publish date:
(2026-07-09 08:27), 1.7.5 (2021-03-11 09:00), 1.7.7 (2021-03-30 13:50), 1.8.2 (2022-01-06 00:20), 1.8.5 (2022-02-01 09:00), 1.8.6 (2022-03-10 15:30), 1.8.7 (2022-03-30 00:00), 1.8.8 (2022-10-30 22:19), 1.9.1 (2024-01-24 16:42), 1.9 (2023-02-04 19:42)
Other packages that cited TDA R package
View TDA citation profile
Other R packages that TDA depends, imports, suggests or enhances
Complete documentation for TDA
Functions, R codes and Examples using the TDA R package
Some associated functions: TDA-internal . TDA-package . alphaComplexDiag . alphaComplexFiltration . alphaShapeDiag . alphaShapeFiltration . bootstrapBand . bootstrapDiagram . bottleneck . circleUnif . clusterTree . distFct . dtm . filtrationDiag . funFiltration . gridDiag . gridFiltration . hausdInterval . kde . kernelDist . knnDE . landscape . maxPersistence . multipBootstrap . plot.clusterTree . plot.diagram . plot.maxPersistence . ripsDiag . ripsFiltration . silhouette . sphereUnif . summary.diagram . torusUnif . wasserstein . 
Some associated R codes: RcppExports.R . alphaComplexDiag.R . alphaComplexFiltration.R . alphaShapeDiag.R . alphaShapeFiltration.R . bootstrapBand.R . bootstrapDiagram.R . bottleneck.R . circleUnif.R . clusterTree.R . distFct.R . dtm.R . filtrationDiag.R . findKtree.R . funFiltration.R . gridBy.R . gridDiag.R . gridFiltration.R . hausdInterval.R . kde.R . kernelDist.R . knnDE.R . landscape.R . maxPersistence.R . multipBootstrap.R . plot.clusterTree.R . plot.diagram.R . plot.maxPersistence.R . plotRule.R . print.clusterTree.R . print.diagram.R . print.maxPersistence.R . print.summary.diagram.R . print.summary.maxPersistence.R . rMultinom.R . ripsDiag.R . ripsFiltration.R . silhouette.R . siloF.R . sphereUnif.R . summary.diagram.R . summary.maxPersistence.R . torusUnif.R . wasserstein.R .  Full TDA package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

eDMA  
Dynamic Model Averaging with Grid Search
Perform dynamic model averaging with grid search as in Dangl and Halling (2012) ...
Download / Learn more Package Citations See dependency  
imguR  
An Imgur.com API Client Package
A complete API client for the image hosting service Imgur.com, including the an imgur graphics devic ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
kriens  
Continuation Passing Style Development
Provides basic functions for Continuation-Passing Style development. ...
Download / Learn more Package Citations See dependency  
shinymodels  
Interactive Assessments of Models
Launch a 'shiny' application for 'tidymodels' results. For classification or regression models, the ...
Download / Learn more Package Citations See dependency  

28,989

R Packages

247,686

Dependencies

76,495

Author Associations

28,990

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA