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SpadeR  

Species-Richness Prediction and Diversity Estimation with R
View on CRAN: Click here


Download and install SpadeR package within the R console
Install from CRAN:
install.packages("SpadeR")

Install from Github:
library("remotes")
install_github("cran/SpadeR")

Install by package version:
library("remotes")
install_version("SpadeR", "0.1.1")



Attach the package and use:
library("SpadeR")
Maintained by
Anne Chao
[Scholar Profile | Author Map]
First Published: 2016-09-06
Latest Update: 2016-09-06
Description:
Estimation of various biodiversity indices and related (dis)similarity measures based on individual-based (abundance) data or sampling-unit-based (incidence) data taken from one or multiple communities/assemblages.
How to cite:
Anne Chao (2016). SpadeR: Species-Richness Prediction and Diversity Estimation with R. R package version 0.1.1, https://cran.r-project.org/web/packages/SpadeR. Accessed 21 Apr. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited SpadeR R package
View SpadeR citation profile
Other R packages that SpadeR depends, imports, suggests or enhances
Complete documentation for SpadeR
Functions, R codes and Examples using the SpadeR R package
Some associated functions: ChaoShared . ChaoSpecies . DivDemoData . Diversity . Genetics . GeneticsDataAbu . MulComSimDemoData . SharedSpecDemoData . SimilarityMult . SimilarityPair . SpecDemoData . TwoComSimDemoData . spader-package . 
Some associated R codes: BasicFun.R . BootstrapFunMa.R . Cf0Fun.R . Chao1_bcEstFun.R . Chao1_bcFun.R . Chao1_sharedEstFun.R . Chao1_sharedFun.R . Chao2_bcEstFun.R . Chao2_bcFun.R . Chao2_sharedEstFun.R . Chao2_sharedFun.R . ChaoShared.Ind.R . ChaoShared.Sam.R . DataTransform.R . Diversity_subroutine.R . ExtenProbFunMa.R . Genetic_subroutine.R . HeteroEstFun.R . HeteroFun.R . HomoEstFun.R . HomoFun.R . InfreqSpeciesGroupInprove.R . Multiple_Community_Measure_subroutine.R . PanEstFun.R . PanEstFun.Sam.R . PanFun.R . PanFun.Sam.R . PanbcEstFun.R . PanbcEstFun.Sam.R . PanbcFun.R . PanbcFun.Sam.R . Q.R . RareSpeciesGroup.R . RareSpeciesGroupInprove.R . SortDataFun.R . SpecAbunAce.R . SpecAbunAce1.R . SpecAbunChao1.R . SpecAbunChao1bc.R . SpecAbunHomo.R . SpecAbunHomoMle.R . SpecAbunJack1.R . SpecAbunJack2.R . SpecAbunOut.R . SpecAbuniChao1.R . SpecInciChao2.R . SpecInciChao2bc.R . SpecInciHomo.R . SpecInciJack1.R . SpecInciJack2.R . SpecInciModelh.R . SpecInciModelh1.R . SpecInciModelth.R . SpecInciModelth1.R . SpecInciOut.R . SpecInciiChao2.R . SpeciesAbundance.R . SpeciesIncidence.R . Two_Community_similarity_subroutine.R . VarEstFun.R . VarEstFun.Sam.R . basicAbun.R . basicInci.R . diff_Chao1.R . diff_Chao1bc.R . diff_Chao2.R . diff_Chao2bc.R . diff_Pan.R . diff_Panbc.R . f.R . logCI.R . print.ChaoShared.R . print.ChaoSpecies.R . spader.R .  Full SpadeR package functions and examples
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