Other packages > Find by keyword >

SimMultiCorrData  

Simulation of Correlated Data with Multiple Variable Types
View on CRAN: Click here


Download and install SimMultiCorrData package within the R console
Install from CRAN:
install.packages("SimMultiCorrData")

Install from Github:
library("remotes")
install_github("cran/SimMultiCorrData")

Install by package version:
library("remotes")
install_version("SimMultiCorrData", "0.2.2")



Attach the package and use:
library("SimMultiCorrData")
Maintained by
Allison Cynthia Fialkowski
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-06-30
Latest Update: 2018-06-28
Description:
Generate continuous (normal or non-normal), binary, ordinal, and count (Poisson or Negative Binomial) variables with a specified correlation matrix.It can also produce a single continuous variable.This package can be used to simulate data sets that mimic real-world situations (i.e. clinical or genetic data sets, plasmodes).All variables are generated from standard normal variables with an imposed intermediate correlation matrix.Continuous variables are simulated by specifying mean, variance, skewness, standardized kurtosis, and fifth and sixth standardized cumulants using either Fleishman's third-order (<doi:10.1007/BF02293811>) or Headrick's fifth-order (<doi:10.1016/S0167-9473(02)00072-5>) polynomial transformation.Binary and ordinal variables are simulated using a modification of the ordsample() function from 'GenOrd'. Count variables are simulated using the inverse cdf method.There are two simulation pathways which differ primarily according to the calculation of the intermediate correlation matrix.In Correlation Method 1, the intercorrelations involving count variables are determined using a simulation based, logarithmic correlation correction (adapting Yahav and Shmueli's 2012 method, <doi:10.1002/asmb.901>).In Correlation Method 2, the count variables are treated as ordinal (adapting Barbiero and Ferrari's 2015 modification of GenOrd, <doi:10.1002/asmb.2072>). There is an optional error loop that corrects the final correlation matrix to be within a user-specified precision value of the target matrix.The package also includes functions to calculate standardized cumulants for theoretical distributions or from real data sets, check if a target correlation matrix is within the possible correlation bounds (given the distributions of the simulated variables), summarize results (numerically or graphically), to verify valid power method pdfs, and to calculate lower standardized kurtosis bounds.
How to cite:
Allison Cynthia Fialkowski (2017). SimMultiCorrData: Simulation of Correlated Data with Multiple Variable Types. R package version 0.2.2, https://cran.r-project.org/web/packages/SimMultiCorrData
Previous versions and publish date:
0.1.0 (2017-06-30 00:44), 0.2.0 (2017-10-25 18:38), 0.2.1 (2017-11-09 19:12)
Other packages that cited SimMultiCorrData R package
View SimMultiCorrData citation profile
Other R packages that SimMultiCorrData depends, imports, suggests or enhances
Functions, R codes and Examples using the SimMultiCorrData R package
Some associated functions: H_params . Headrick.dist . SimMultiCorrData . calc_final_corr . calc_fisherk . calc_lower_skurt . calc_moments . calc_theory . cdf_prob . chat_nb . chat_pois . denom_corr_cat . error_loop . error_vars . find_constants . findintercorr . findintercorr2 . findintercorr_cat_nb . findintercorr_cat_pois . findintercorr_cont . findintercorr_cont_cat . findintercorr_cont_nb . findintercorr_cont_nb2 . findintercorr_cont_pois . findintercorr_cont_pois2 . findintercorr_nb . findintercorr_pois . findintercorr_pois_nb . fleish . fleish_Hessian . fleish_skurt_check . intercorr_fleish . intercorr_poly . max_count_support . nonnormvar1 . ordnorm . pdf_check . plot_cdf . plot_pdf_ext . plot_pdf_theory . plot_sim_cdf . plot_sim_ext . plot_sim_pdf_ext . plot_sim_pdf_theory . plot_sim_theory . poly . poly_skurt_check . power_norm_corr . rcorrvar . rcorrvar2 . separate_rho . sim_cdf_prob . stats_pdf . valid_corr . valid_corr2 . var_cat . 
Some associated R codes: H_params-data.R . Headrick.dist-data.R . SimMultiCorrData.R . calc_final_corr.R . calc_fisherk.R . calc_lower_skurt.R . calc_moments.R . calc_theory.R . cdf_prob.R . chat_nb.R . chat_pois.R . denom_corr_cat.R . error_loop.R . error_vars.R . find_constants.R . findintercorr.R . findintercorr2.R . findintercorr_cat_nb.R . findintercorr_cat_pois.R . findintercorr_cont.R . findintercorr_cont_cat.R . findintercorr_cont_nb.R . findintercorr_cont_nb2.R . findintercorr_cont_pois.R . findintercorr_cont_pois2.R . findintercorr_nb.R . findintercorr_pois.R . findintercorr_pois_nb.R . fleish.R . fleish_Hessian.R . fleish_skurt_check.R . intercorr_fleish.R . intercorr_poly.R . max_count_support.R . nonnormvar1.R . ordnorm.R . pdf_check.R . plot_cdf.R . plot_pdf_ext.R . plot_pdf_theory.R . plot_sim_cdf.R . plot_sim_ext.R . plot_sim_pdf_ext.R . plot_sim_pdf_theory.R . plot_sim_theory.R . poly.R . poly_skurt_check.R . power_norm_corr.R . rcorrvar.R . rcorrvar2.R . separate_rho.R . sim_cdf_prob.R . stats_pdf.R . valid_corr.R . valid_corr2.R . var_cat.R .  Full SimMultiCorrData package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

stagePop  
Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time
Provides facilities to implement and run population models of stage-structured species... ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
multiocc  
Fits Multivariate Spatio-Temporal Occupancy Model
Spatio-temporal multivariate occupancy models can handle multiple species in occupancy models. This ...
Download / Learn more Package Citations See dependency  
CompoundEvents  
Statistical Modeling of Compound Events
Tools for extracting occurrences, assessing potential driving factors, predicting occurrences, and q ...
Download / Learn more Package Citations See dependency  
MatrixEQTL  
Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
Matrix eQTL is designed for fast eQTL analysis on large datasets. Matrix eQTL can test for associat ...
Download / Learn more Package Citations See dependency  
ismev  
An Introduction to Statistical Modeling of Extreme Values
Functions to support the computations carried out in `An Introduction to Statistical Modeling of Ex ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns