Other packages > Find by keyword >

SimCorrMix  

Simulation of Correlated Data with Multiple Variable Types Including Continuous and Count Mixture Distributions
View on CRAN: Click here


Download and install SimCorrMix package within the R console
Install from CRAN:
install.packages("SimCorrMix")

Install from Github:
library("remotes")
install_github("cran/SimCorrMix")

Install by package version:
library("remotes")
install_version("SimCorrMix", "0.1.1")



Attach the package and use:
library("SimCorrMix")
Maintained by
Allison Cynthia Fialkowski
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-02-26
Latest Update: 2018-07-01
Description:
Generate continuous (normal, non-normal, or mixture distributions), binary, ordinal, and count (regular or zero-inflated, Poisson or Negative Binomial) variables with a specified correlation matrix, or one continuous variable with a mixture distribution.This package can be used to simulate data sets that mimic real-world clinical or genetic data sets (i.e., plasmodes, as in Vaughan et al., 2009 <doi:10.1016/j.csda.2008.02.032>).The methods extend those found in the 'SimMultiCorrData' R package.Standard normal variables with an imposed intermediate correlation matrix are transformed to generate the desired distributions. Continuous variables are simulated using either Fleishman (1978)'s third order <doi:10.1007/BF02293811> or Headrick (2002)'s fifth order <doi:10.1016/S0167-9473(02)00072-5> polynomial transformation method (the power method transformation, PMT).Non-mixture distributions require the user to specify mean, variance, skewness, standardized kurtosis, and standardized fifth and sixth cumulants.Mixture distributions require these inputs for the component distributions plus the mixing probabilities.Simulation occurs at the component level for continuous mixture distributions.The target correlation matrix is specified in terms of correlations with components of continuous mixture variables.These components are transformed into the desired mixture variables using random multinomial variables based on the mixing probabilities.However, the package provides functions to approximate expected correlations with continuous mixture variables given target correlations with the components. Binary and ordinal variables are simulated using a modification of ordsample() in package 'GenOrd'. Count variables are simulated using the inverse CDF method.There are two simulation pathways which calculate intermediate correlations involving count variables differently. Correlation Method 1 adapts Yahav and Shmueli's 2012 method <doi:10.1002/asmb.901> and performs best with large count variable means and positive correlations or small means and negative correlations.Correlation Method 2 adapts Barbiero and Ferrari's 2015 modification of the 'GenOrd' package <doi:10.1002/asmb.2072> and performs best under the opposite scenarios.The optional error loop may be used to improve the accuracy of the final correlation matrix.The package also contains functions to calculate the standardized cumulants of continuous mixture distributions, check parameter inputs, calculate feasible correlation boundaries, and summarize and plot simulated variables.
How to cite:
Allison Cynthia Fialkowski (2018). SimCorrMix: Simulation of Correlated Data with Multiple Variable Types Including Continuous and Count Mixture Distributions. R package version 0.1.1, https://cran.r-project.org/web/packages/SimCorrMix. Accessed 15 Jul. 2026.
Previous versions and publish date:
(2026-07-09 08:26), 0.1.0 (2018-02-26 20:04)
Other packages that cited SimCorrMix R package
View SimCorrMix citation profile
Other R packages that SimCorrMix depends, imports, suggests or enhances
Complete documentation for SimCorrMix
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

binhf  
Haar-Fisz Functions for Binomial Data
Binomial Haar-Fisz transforms for Gaussianization as in Nunes and Nason (2009). ...
Download / Learn more Package Citations See dependency  
footBayes  
Fitting Bayesian and MLE Football Models
This is the first package allowing for the estimation, visualization and prediction of the most wel ...
Download / Learn more Package Citations See dependency  
pulseTD  
Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data
A tool for analyzing the transcription, processing and degradation rates of genes by 4sU-seq (the Me ...
Download / Learn more Package Citations See dependency  
gamlss.add  
Extra Additive Terms for Generalized Additive Models for Location Scale and Shape
Interface for extra smooth functions including tensor products, neural networks and decision trees. ...
Download / Learn more Package Citations See dependency  
PermAlgo  
Permutational Algorithm to Simulate Survival Data
This version of the permutational algorithm generates a dataset in which event and censoring times ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA