Other packages > Find by keyword >

SimBIID  

Simulation-Based Inference Methods for Infectious Disease Models
View on CRAN: Click here


Download and install SimBIID package within the R console
Install from CRAN:
install.packages("SimBIID")

Install from Github:
library("remotes")
install_github("cran/SimBIID")

Install by package version:
library("remotes")
install_version("SimBIID", "0.2.1")



Attach the package and use:
library("SimBIID")
Maintained by
Trevelyan J. McKinley
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-08-23
Latest Update: 2021-02-04
Description:
Provides some code to run simulations of state-space models, and then use these in the Approximate Bayesian Computation Sequential Monte Carlo (ABC-SMC) algorithm of Toni et al. (2009) <doi:10.1098/rsif.2008.0172> and a bootstrap particle filter based particle Markov chain Monte Carlo (PMCMC) algorithm (Andrieu et al., 2010 <doi:10.1111/j.1467-9868.2009.00736.x>). Also provides functions to plot and summarise the outputs.
How to cite:
Trevelyan J. McKinley (2019). SimBIID: Simulation-Based Inference Methods for Infectious Disease Models. R package version 0.2.1, https://cran.r-project.org/web/packages/SimBIID. Accessed 07 Nov. 2024.
Previous versions and publish date:
0.1.0 (2019-08-23 17:30), 0.1.1 (2019-08-25 00:00), 0.1.2 (2019-09-19 16:20), 0.1.3 (2019-11-21 21:50), 0.1.4 (2020-03-03 12:40), 0.2.0 (2020-05-20 22:00)
Other packages that cited SimBIID R package
View SimBIID citation profile
Other R packages that SimBIID depends, imports, suggests or enhances
Complete documentation for SimBIID
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

robregcc  
Robust Regression with Compositional Covariates
We implement the algorithm estimating the parameters of the robust regression model with composition ...
Download / Learn more Package Citations See dependency  
con2aqi  
Calculate the AQI from Pollutant Concentration
To calculate the AQI (Air Quality Index) from pollutant concentration data. O3, PM2.5, PM10, CO, SO ...
Download / Learn more Package Citations See dependency  
bacondecomp  
Goodman-Bacon Decomposition
Decomposition for differences-in-differences with variation in treatment timing from Goodman-Bacon ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

23,092

R Packages

198,677

Dependencies

62,675

Author Associations

23,089

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA