Other packages > Find by keyword >

SimBIID  

Simulation-Based Inference Methods for Infectious Disease Models
View on CRAN: Click here


Download and install SimBIID package within the R console
Install from CRAN:
install.packages("SimBIID")

Install from Github:
library("remotes")
install_github("cran/SimBIID")

Install by package version:
library("remotes")
install_version("SimBIID", "0.2.2")



Attach the package and use:
library("SimBIID")
Maintained by
Trevelyan J. McKinley
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-08-23
Latest Update: 2025-04-03
Description:
Provides some code to run simulations of state-space models, and then use these in the Approximate Bayesian Computation Sequential Monte Carlo (ABC-SMC) algorithm of Toni et al. (2009) <doi:10.1098/rsif.2008.0172> and a bootstrap particle filter based particle Markov chain Monte Carlo (PMCMC) algorithm (Andrieu et al., 2010 <doi:10.1111/j.1467-9868.2009.00736.x>). Also provides functions to plot and summarise the outputs.
How to cite:
Trevelyan J. McKinley (2019). SimBIID: Simulation-Based Inference Methods for Infectious Disease Models. R package version 0.2.2, https://cran.r-project.org/web/packages/SimBIID. Accessed 07 Oct. 2026.
Previous versions and publish date:
(2026-07-09 08:26), 0.1.0 (2019-08-23 17:30), 0.1.1 (2019-08-25 00:00), 0.1.2 (2019-09-19 16:20), 0.1.3 (2019-11-21 21:50), 0.1.4 (2020-03-03 12:40), 0.2.0 (2020-05-20 22:00), 0.2.1 (2021-02-04 06:20)
Other packages that cited SimBIID R package
View SimBIID citation profile
Other R packages that SimBIID depends, imports, suggests or enhances
Complete documentation for SimBIID
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

splm  
Econometric Models for Spatial Panel Data
ML and GM estimation and diagnostic testing of econometric models for spatial panel data. ...
Download / Learn more Package Citations See dependency  
skewlmm  
Scale Mixture of Skew-Normal Linear Mixed Models
It fits scale mixture of skew-normal linear mixed models using an expectation–maximization (EM) ty ...
Download / Learn more Package Citations See dependency  
plaqr  
Partially Linear Additive Quantile Regression
Estimation, prediction, thresholding, transformation, and plotting for partially linear additive qua ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
ggTimeSeries  
Time Series Visualisations Using the Grammar of Graphics
Provides additional display mediums for time series visualisations. ...
Download / Learn more Package Citations See dependency  
blandr  
Bland-Altman Method Comparison
Carries out Bland Altman analyses (also known as a Tukey mean-difference plot) as described by JM B ...
Download / Learn more Package Citations See dependency  

28,905

R Packages

247,686

Dependencies

76,495

Author Associations

28,906

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA