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SeqMADE  

Network Module-Based Model in the Differential Expression Analysis for RNA-Seq
View on CRAN: Click here


Download and install SeqMADE package within the R console
Install from CRAN:
install.packages("SeqMADE")

Install from Github:
library("remotes")
install_github("cran/SeqMADE")

Install by package version:
library("remotes")
install_version("SeqMADE", "1.0")



Attach the package and use:
library("SeqMADE")
Maintained by
Mingli Lei
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-06-27
Latest Update: 2016-06-27
Description:
A network module-based generalized linear model for differential expression analysis with the count-based sequence data from RNA-Seq.
How to cite:
Mingli Lei (2016). SeqMADE: Network Module-Based Model in the Differential Expression Analysis for RNA-Seq. R package version 1.0, https://cran.r-project.org/web/packages/SeqMADE. Accessed 07 Nov. 2024.
Previous versions and publish date:
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View SeqMADE citation profile
Other R packages that SeqMADE depends, imports, suggests or enhances
Complete documentation for SeqMADE
Functions, R codes and Examples using the SeqMADE R package
Some associated functions: Factor . SeqMADE-package . exprs . moduleMatrix . nbGLM . nbGLMdir . nbGLMdirperm . networkModule . 
Some associated R codes: Full SeqMADE package functions and examples
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