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SeqAlignR  

Sequence Alignment and Visualization Tool
View on CRAN: Click here


Download and install SeqAlignR package within the R console
Install from CRAN:
install.packages("SeqAlignR")

Install from Github:
library("remotes")
install_github("cran/SeqAlignR")

Install by package version:
library("remotes")
install_version("SeqAlignR", "0.1.1")



Attach the package and use:
library("SeqAlignR")
Maintained by
Leonard Persson Norblad
[Scholar Profile | Author Map]
First Published: 2024-02-07
Latest Update: 2024-02-07
Description:
Computes the optimal alignment of two character sequences. Visualizes the result of the alignment in a matrix plot. Needleman, Saul B.; Wunsch, Christian D. (1970) "A general method applicable to the search for similarities in the amino acid sequence of two proteins" .
How to cite:
Leonard Persson Norblad (2024). SeqAlignR: Sequence Alignment and Visualization Tool. R package version 0.1.1, https://cran.r-project.org/web/packages/SeqAlignR. Accessed 29 Mar. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited SeqAlignR R package
View SeqAlignR citation profile
Other R packages that SeqAlignR depends, imports, suggests or enhances
Complete documentation for SeqAlignR
Functions, R codes and Examples using the SeqAlignR R package
Some associated functions: SeqAlignR . align_sequences . plot.alignment . print.alignment . 
Some associated R codes: align_sequences.R . needleman.R . plot.R . print.R .  Full SeqAlignR package functions and examples
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