Other packages > Find by keyword >

SeqAlignR  

Sequence Alignment and Visualization Tool
View on CRAN: Click here


Download and install SeqAlignR package within the R console
Install from CRAN:
install.packages("SeqAlignR")

Install from Github:
library("remotes")
install_github("cran/SeqAlignR")

Install by package version:
library("remotes")
install_version("SeqAlignR", "0.1.1")



Attach the package and use:
library("SeqAlignR")
Maintained by
Leonard Persson Norblad
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-02-07
Latest Update: 2024-02-07
Description:
Computes the optimal alignment of two character sequences. Visualizes the result of the alignment in a matrix plot. Needleman, Saul B.; Wunsch, Christian D. (1970) "A general method applicable to the search for similarities in the amino acid sequence of two proteins" .
How to cite:
Leonard Persson Norblad (2024). SeqAlignR: Sequence Alignment and Visualization Tool. R package version 0.1.1, https://cran.r-project.org/web/packages/SeqAlignR. Accessed 06 Mar. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited SeqAlignR R package
View SeqAlignR citation profile
Other R packages that SeqAlignR depends, imports, suggests or enhances
Complete documentation for SeqAlignR
Functions, R codes and Examples using the SeqAlignR R package
Some associated functions: SeqAlignR . align_sequences . plot.alignment . print.alignment . 
Some associated R codes: align_sequences.R . needleman.R . plot.R . print.R .  Full SeqAlignR package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

DatabionicSwarm  
Swarm Intelligence for Self-Organized Clustering
Algorithms implementing populations of agents that interact with one another and sense their environ ...
Download / Learn more Package Citations See dependency  
lbfgs  
Limited-memory BFGS Optimization
A wrapper built around the libLBFGS optimization library by Naoaki Okazaki. The lbfgs package implem ...
Download / Learn more Package Citations See dependency  
mlr3viz  
Visualizations for 'mlr3'
Visualization package of the 'mlr3' ecosystem. It features plots for mlr3 objects such as tasks, le ...
Download / Learn more Package Citations See dependency  
solitude  
An Implementation of Isolation Forest
Isolation forest is anomaly detection method introduced by the paper Isolation based Anomaly Detecti ...
Download / Learn more Package Citations See dependency  
openxlsx  
Read, Write and Edit xlsx Files
Simplifies the creation of Excel .xlsx files by providing a high level interface to writing, stylin ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,244

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA