Other packages > Find by keyword >

SeedMatchR  

Find Matches to Canonical SiRNA Seeds in Genomic Features
View on CRAN: Click here


Download and install SeedMatchR package within the R console
Install from CRAN:
install.packages("SeedMatchR")

Install from Github:
library("remotes")
install_github("cran/SeedMatchR")

Install by package version:
library("remotes")
install_version("SeedMatchR", "1.1.1")



Attach the package and use:
library("SeedMatchR")
Maintained by
Tareian Cazares
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-06-20
Latest Update:
Description:
On-target gene knockdown using siRNA ideally results from binding fully complementary regions in mRNA transcripts to induce cleavage. Off-target siRNA gene knockdown can occur through several modes, one being a seed-mediated mechanism mimicking miRNA gene regulation. Seed-mediated off-target effects occur when the ~8 nucleotides at the 5
How to cite:
Tareian Cazares (2023). SeedMatchR: Find Matches to Canonical SiRNA Seeds in Genomic Features. R package version 1.1.1, https://cran.r-project.org/web/packages/SeedMatchR. Accessed 08 Jun. 2026.
Previous versions and publish date:
1.0.1 (2023-06-20 19:40), 1.1.1 (2023-10-24 22:30)
Other packages that cited SeedMatchR R package
View SeedMatchR citation profile
Other R packages that SeedMatchR depends, imports, suggests or enhances
Complete documentation for SeedMatchR
Functions, R codes and Examples using the SeedMatchR R package
Full SeedMatchR package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

FluMoDL  
Influenza-Attributable Mortality with Distributed-Lag Models
Functions to estimate the mortality attributable to influenza and temperature, using distributed-la ...
Download / Learn more Package Citations See dependency  
penppml  
Penalized Poisson Pseudo Maximum Likelihood Regression
A set of tools that enables efficient estimation of penalized Poisson Pseudo Maximum Likelihood reg ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
ODMeans  
OD-Means: k-Means for Origin-Destination
OD-means is a hierarchical adaptive k-means algorithm based on origin-destination pairs. In the fir ...
Download / Learn more Package Citations See dependency  
AdvBinomApps  
Upper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information
Functions to compute upper Clopper-Pearson confidence limits of early life failure probabilities and ...
Download / Learn more Package Citations See dependency  
geofacet  
'ggplot2' Faceting Utilities for Geographical Data
Provides geographical faceting functionality for 'ggplot2'. Geographical faceting arranges a sequen ...
Download / Learn more Package Citations See dependency  

27,372

R Packages

233,548

Dependencies

72,820

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA