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SeedMatchR
View on CRAN: Click
here
Download and install SeedMatchR package within the R console
Install from CRAN:
install.packages("SeedMatchR")
Install from Github:
library("remotes")
install_github("cran/SeedMatchR")
Install by package version:
library("remotes")
install_version("SeedMatchR", "1.1.1")
Attach the package and use:
library("SeedMatchR")
Maintained by
Tareian Cazares
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.SeedMatchR . https://tacazares.github.io/SeedMatchR/ . SeedMatchR results . SeedMatchR.pdf . SeedMatchR . SeedMatchR_1.1.1.tar.gz . SeedMatchR_1.1.1.zip . SeedMatchR_1.1.1.zip . SeedMatchR_1.1.1.zip . SeedMatchR_1.1.1.tgz . SeedMatchR_1.1.1.tgz . SeedMatchR archive . https://CRAN.R-project.org/package=SeedMatchR .
First Published: 2023-06-20
Latest Update: 2023-10-24
Description:
On-target gene knockdown using siRNA ideally results from binding
fully complementary regions in mRNA transcripts to induce cleavage.
Off-target siRNA gene knockdown can occur through several modes, one being
a seed-mediated mechanism mimicking miRNA gene regulation. Seed-mediated
off-target effects occur when the ~8 nucleotides at the 5
How to cite:
Tareian Cazares (2023). SeedMatchR: Find Matches to Canonical SiRNA Seeds in Genomic Features. R package version 1.1.1, https://cran.r-project.org/web/packages/SeedMatchR. Accessed 17 Feb. 2025.
Previous versions and publish date:
1.0.1 (2023-06-20 19:40)
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