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ScoreEB
View on CRAN: Click
here
Download and install ScoreEB package within the R console
Install from CRAN:
install.packages("ScoreEB")
Install from Github:
library("remotes")
install_github("cran/ScoreEB")
Install by package version:
library("remotes")
install_version("ScoreEB", "0.1.1")
Attach the package and use:
library("ScoreEB")
Maintained by
Wenlong Ren
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-09-09
Latest Update: 2021-09-15
Description:
Perform association test within linear mixed model framework using score test integrated with Empirical Bayes for genome-wide association study. Firstly, score test was conducted for each marker under linear mixed model framework, taking into account the genetic relatedness and population structure. And then all the potentially associated markers were selected with a less stringent criterion. Finally, all the selected markers were placed into a multi-locus model to identify the true quantitative trait nucleotide.
How to cite:
Wenlong Ren (2021). ScoreEB: Score Test Integrated with Empirical Bayes for Association Study. R package version 0.1.1, https://cran.r-project.org/web/packages/ScoreEB. Accessed 21 Nov. 2024.
Previous versions and publish date:
0.1.0 (2021-09-09 11:00)
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imports, suggests or enhances
Complete documentation for ScoreEB
Functions, R codes and Examples using
the ScoreEB R package
Some associated functions: PCG . ScoreEB . ebayes_EM . geno . likelihood . multinormal . pheno .
Some associated R codes: ScoreEB.R . Full ScoreEB package functions and examples
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