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SSDM
View on CRAN: Click
here
Download and install SSDM package within the R console
Install from CRAN:
install.packages("SSDM")
Install from Github:
library("remotes")
install_github("cran/SSDM")
Install by package version:
library("remotes")
install_version("SSDM", "0.2.9")
Attach the package and use:
library("SSDM")
Maintained by
Sylvain Schmitt
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-02-12
Latest Update: 2020-02-28
Description:
Allows to map species richness and endemism based on stacked species distribution models (SSDM). Individuals SDMs can be created using a single or multiple algorithms (ensemble SDMs). For each species, an SDM can yield a habitat suitability map, a binary map, a between-algorithm variance map, and can assess variable importance, algorithm accuracy, and between- algorithm correlation. Methods to stack individual SDMs include summing individual probabilities and thresholding then summing. Thresholding can be based on a specific evaluation metric or by drawing repeatedly from a Bernoulli distribution. The SSDM package also provides a user-friendly interface.
How to cite:
Sylvain Schmitt (2016). SSDM: Stacked Species Distribution Modelling. R package version 0.2.9, https://cran.r-project.org/web/packages/SSDM. Accessed 21 Nov. 2024.
Previous versions and publish date:
Other packages that cited SSDM R package
View SSDM citation profile
Other R packages that SSDM depends,
imports, suggests or enhances
Complete documentation for SSDM
Functions, R codes and Examples using
the SSDM R package
Some associated functions: Algorithm.SDM-class . Ensemble.SDM-class . Env . Occurrences . SSDM . Stacked.SDM-class . ensemble . ensemble_modelling . evaluate . gui . load.model . load_occ . load_var . mapDiversity . modelling . plot.model . project . save.model . stack_modelling . stacking . update-Stacked.SDM-method .
Some associated R codes: Algorithm.SDM.R . Ensemble.SDM.R . Env.R . Occurrences.R . PA.select.R . SDM.R . SSDM.R . Stacked.SDM.R . accuracy.R . checkargs.R . data.values.R . ensemble.R . ensemble_modelling.R . evaluate.R . evaluate.axes.R . get_PA.R . get_model.R . gui.R . load_model.R . load_occ.R . load_var.R . mapDiversity.R . modelling.R . optim.thresh.R . plot.model.R . project.R . save.model.R . stack_modelling.R . stacking.R . update.stack.R . zzz.R . Full SSDM package functions and examples
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