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SMASH  

Subclone Multiplicity Allocation and Somatic Heterogeneity
View on CRAN: Click here


Download and install SMASH package within the R console
Install from CRAN:
install.packages("SMASH")

Install from Github:
library("remotes")
install_github("cran/SMASH")

Install by package version:
library("remotes")
install_version("SMASH", "1.0.0")



Attach the package and use:
library("SMASH")
Maintained by
Paul Little
[Scholar Profile | Author Map]
Description:
Cluster user-supplied somatic read counts with corresponding allele-specific copy number and tumor purity to infer feasible underlying intra-tumor heterogeneity in terms ofnumber of subclones, multiplicity, and allocation (Little et al. (2019) <doi:10.1186/s13073-019-0643-9>).
How to cite:
Paul Little (). SMASH: Subclone Multiplicity Allocation and Somatic Heterogeneity. R package version 1.0.0, https://cran.r-project.org/web/packages/SMASH. Accessed 01 Apr. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited SMASH R package
View SMASH citation profile
Other R packages that SMASH depends, imports, suggests or enhances
Complete documentation for SMASH
Functions, R codes and Examples using the SMASH R package
Full SMASH package functions and examples
Downloads during the last 30 days
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