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SLIDE  

Single Cell Linkage by Distance Estimation is SLIDE
View on CRAN: Click here


Download and install SLIDE package within the R console
Install from CRAN:
install.packages("SLIDE")

Install from Github:
library("remotes")
install_github("cran/SLIDE")

Install by package version:
library("remotes")
install_version("SLIDE", "1.0.0")



Attach the package and use:
library("SLIDE")
Maintained by
Arjun Panda
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-06-15
Latest Update: 2018-06-15
Description:
This statistical method uses the nearest neighbor algorithm to estimate absolute distances between single cells based on a chosen constellation of surface proteins, with these distances being a measure of the similarity between the two cells being compared. Based on Sen, N., Mukherjee, G., and Arvin, A.M. (2015) <doi:10.1016/j.ymeth.2015.07.008>.
How to cite:
Arjun Panda (2018). SLIDE: Single Cell Linkage by Distance Estimation is SLIDE. R package version 1.0.0, https://cran.r-project.org/web/packages/SLIDE. Accessed 21 Nov. 2024.
Previous versions and publish date:
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Other packages that cited SLIDE R package
View SLIDE citation profile
Other R packages that SLIDE depends, imports, suggests or enhances
Complete documentation for SLIDE
Functions, R codes and Examples using the SLIDE R package
Some associated functions: I_sig . UN_sig . bootstrap_cutoff . slide . 
Some associated R codes: bootstrap_cutoff.R . slide.R . slide_data.R .  Full SLIDE package functions and examples
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