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SKAT  

SNP-Set (Sequence) Kernel Association Test
View on CRAN: Click here


Download and install SKAT package within the R console
Install from CRAN:
install.packages("SKAT")

Install from Github:
library("remotes")
install_github("cran/SKAT")

Install by package version:
library("remotes")
install_version("SKAT", "2.2.5")



Attach the package and use:
library("SKAT")
Maintained by
Seunggeun (Shawn) Lee
[Scholar Profile | Author Map]
First Published: 2012-05-11
Latest Update: 2023-01-15
Description:
Functions for kernel-regression-based association tests including Burden test, SKAT and SKAT-O. These methods aggregate individual SNP score statistics in a SNP set and efficiently compute SNP-set level p-values.
How to cite:
Seunggeun (Shawn) Lee (2012). SKAT: SNP-Set (Sequence) Kernel Association Test. R package version 2.2.5, https://cran.r-project.org/web/packages/SKAT. Accessed 10 May. 2025.
Previous versions and publish date:
0.75 (2012-05-11 19:45), 0.76 (2012-06-27 07:41), 0.77 (2012-07-24 20:37), 0.78 (2012-09-06 21:33), 0.79 (2012-10-09 07:54), 0.81 (2013-01-15 07:26), 0.82 (2013-03-02 17:05), 0.83 (2013-05-09 16:59), 0.90 (2013-05-23 19:55), 0.91 (2013-06-03 18:27), 0.92 (2013-10-09 09:24), 0.93 (2013-11-18 20:42), 0.95 (2014-02-18 07:21), 1.0.1 (2014-11-04 20:04), 1.0.7 (2015-04-19 07:39), 1.0.9 (2015-06-14 15:26), 1.0 (2014-10-31 17:23), 1.1.2 (2015-09-08 00:26), 1.1.4 (2016-04-20 21:19), 1.2.1 (2016-06-28 20:16), 1.3.0 (2017-05-18 06:04), 1.3.2.1 (2017-08-03 07:20), 1.3.2 (2017-07-24 23:43), 2.0.0 (2020-03-09 13:10), 2.0.1 (2020-10-20 11:40), 2.2.4 (2022-03-29 14:50)
Other packages that cited SKAT R package
View SKAT citation profile
Other R packages that SKAT depends, imports, suggests or enhances
Complete documentation for SKAT
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