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SCdeconR  

Deconvolution of Bulk RNA-Seq Data using Single-Cell RNA-Seq Data as Reference
View on CRAN: Click here


Download and install SCdeconR package within the R console
Install from CRAN:
install.packages("SCdeconR")

Install from Github:
library("remotes")
install_github("cran/SCdeconR")

Install by package version:
library("remotes")
install_version("SCdeconR", "1.0.0")



Attach the package and use:
library("SCdeconR")
Maintained by
Yuanhang Liu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-03-22
Latest Update: 2024-03-22
Description:
Streamlined workflow from deconvolution of bulk RNA-seq data to downstream differential expression and gene-set enrichment analysis. Provide various visualization functions.
How to cite:
Yuanhang Liu (2024). SCdeconR: Deconvolution of Bulk RNA-Seq Data using Single-Cell RNA-Seq Data as Reference. R package version 1.0.0, https://cran.r-project.org/web/packages/SCdeconR. Accessed 07 Nov. 2024.
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Complete documentation for SCdeconR
Functions, R codes and Examples using the SCdeconR R package
Full SCdeconR package functions and examples
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