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SCORPIUS  

Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data
View on CRAN: Click here


Download and install SCORPIUS package within the R console
Install from CRAN:
install.packages("SCORPIUS")

Install from Github:
library("remotes")
install_github("cran/SCORPIUS")

Install by package version:
library("remotes")
install_version("SCORPIUS", "1.0.10")



Attach the package and use:
library("SCORPIUS")
Maintained by
Robrecht Cannoodt
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-09-15
Latest Update: 2023-08-07
Description:
An accurate and easy tool for performing linear trajectory inference on single cells using single-cell RNA sequencing data. In addition, 'SCORPIUS' provides functions for discovering the most important genes with respect to the reconstructed trajectory, as well as nice visualisation tools. Cannoodt et al. (2016) .
How to cite:
Robrecht Cannoodt (2017). SCORPIUS: Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data. R package version 1.0.10, https://cran.r-project.org/web/packages/SCORPIUS. Accessed 27 Jun. 2026.
Previous versions and publish date:
1.0.2 (2018-06-29 16:55), 1.0.3 (2019-05-27 17:22), 1.0.4.1 (2019-08-07 13:50), 1.0.4 (2019-08-05 18:50), 1.0.5 (2019-12-08 03:00), 1.0.6 (2020-03-16 17:20), 1.0.7 (2020-05-11 13:00), 1.0.8 (2021-06-09 14:40), 1.0.9 (2023-08-07 19:30), 1.0.10 (2025-11-26 16:30), 1.0 (2017-09-15 17:46)
Other packages that cited SCORPIUS R package
View SCORPIUS citation profile
Other R packages that SCORPIUS depends, imports, suggests or enhances
Complete documentation for SCORPIUS
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