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SCOPRO  

Score Projection Between in 'Vivo' and in 'Vitro' Datasets
View on CRAN: Click here


Download and install SCOPRO package within the R console
Install from CRAN:
install.packages("SCOPRO")

Install from Github:
library("remotes")
install_github("cran/SCOPRO")

Install by package version:
library("remotes")
install_version("SCOPRO", "0.1.0")



Attach the package and use:
library("SCOPRO")
Maintained by
Gabriele Lubatti
[Scholar Profile | Author Map]
First Published: 2022-08-23
Latest Update: 2022-08-23
Description:
Assigns a score projection from 0 to 1 between a given in 'vivo' stage and each single cluster from an in 'vitro' dataset. The score is assigned based on the the fraction of specific markers of the in 'vivo' stage that are conserved in the in 'vitro' clusters .
How to cite:
Gabriele Lubatti (2022). SCOPRO: Score Projection Between in 'Vivo' and in 'Vitro' Datasets. R package version 0.1.0, https://cran.r-project.org/web/packages/SCOPRO. Accessed 07 Apr. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited SCOPRO R package
View SCOPRO citation profile
Other R packages that SCOPRO depends, imports, suggests or enhances
Complete documentation for SCOPRO
Functions, R codes and Examples using the SCOPRO R package
Some associated functions: SCOPRO . filter_in_vitro . plot_score . plot_score_genes . select_common_genes . select_no_common_genes . select_top_markers . 
Some associated R codes: core_functions.R . markers_functions.R . plotting_functions.R .  Full SCOPRO package functions and examples
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