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RootscanR  

Stitching and Analyzing Root Scans
View on CRAN: Click here


Download and install RootscanR package within the R console
Install from CRAN:
install.packages("RootscanR")

Install from Github:
library("remotes")
install_github("cran/RootscanR")

Install by package version:
library("remotes")
install_version("RootscanR", "0.0.1")



Attach the package and use:
library("RootscanR")
Maintained by
Sophie Kersting
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-10-30
Latest Update: 2025-10-30
Description:
Minirhizotrons are widely used to observe and explore roots and their growth. This package provides the means to stitch images and divide them into depth layers. Please note that this R package was developed alongside the following manuscript: Stitching root scans and extracting depth layer information – a workflow and practical examples, S. Kersting, L. Knüver, and M. Fischer. The manuscript is currently in preparation and should be citet as soon as it is available. This project was supported by the project ArtIGROW, which is a part of the WIR!-Alliance ArtIFARM –Artificial Intelligence in Farming funded by the German Federal Ministry of Research, Technology and Space (No. 03WIR4805).
How to cite:
Sophie Kersting (2025). RootscanR: Stitching and Analyzing Root Scans. R package version 0.0.1, https://cran.r-project.org/web/packages/RootscanR. Accessed 06 Jun. 2026.
Previous versions and publish date:
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Complete documentation for RootscanR
Functions, R codes and Examples using the RootscanR R package
Full RootscanR package functions and examples
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