Other packages > Find by keyword >

Rarefy  

Rarefaction Methods
View on CRAN: Click here


Download and install Rarefy package within the R console
Install from CRAN:
install.packages("Rarefy")

Install from Github:
library("remotes")
install_github("cran/Rarefy")

Install by package version:
library("remotes")
install_version("Rarefy", "1.1.1")



Attach the package and use:
library("Rarefy")
Maintained by
Elisa Thouverai
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-05-27
Latest Update:
Description:
Includes functions for the calculation of spatially and non-spatially explicit rarefaction curves using different indices of taxonomic, functional and phylogenetic diversity. The user can also rarefy any biodiversity metric as provided by a self-written function (or an already existent one) that gives as output a vector with the values of a certain index of biodiversity calculated per plot (Ricotta, C., Acosta, A., Bacaro, G., Carboni, M., Chiarucci, A., Rocchini, D., Pavoine, S. (2019) ; Bacaro, G., Altobelli, A., Cameletti, M., Ciccarelli, D., Martellos, S., Palmer, M. W.,
How to cite:
Elisa Thouverai (2020). Rarefy: Rarefaction Methods. R package version 1.1.1, https://cran.r-project.org/web/packages/Rarefy. Accessed 07 Aug. 2026.
Previous versions and publish date:
(2026-07-09 08:21), 1.0 (2020-05-27 12:30), 1.1.1 (2023-07-06 15:13), 1.1 (2021-03-12 00:10)
Other packages that cited Rarefy R package
View Rarefy citation profile
Other R packages that Rarefy depends, imports, suggests or enhances
Functions, R codes and Examples using the Rarefy R package
Some associated functions: directionalSAC . duneFVG . duneFVG.tr8 . duneFVG.xy . rao_permuted . rare_alpha . rare_beta . rare_phylo . rarexpected_fun . ser_functional . 
Some associated R codes: directionalSAC.R . rao_permuted.R . rare_alpha.R . rare_beta.R . rare_phylo.R . rarexpected_fun.R . ser_functional.R . ser_phylo.R .  Full Rarefy package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

enrichwith  
Methods to Enrich R Objects with Extra Components
Provides the "enrich" method to enrich list-like R objects with new, relevant components. The curren ...
Download / Learn more Package Citations See dependency  
modelwordcloud  
Model Word Clouds
Makes a word cloud of text, sized by the frequency of the word, and colored either by user-specified ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
BayesESS  
Determining Effective Sample Size
Determines effective sample size of a parametric prior distribution in Bayesian models. For a web-b ...
Download / Learn more Package Citations See dependency  
bbricks  
Bayesian Methods and Graphical Model Structures for Statistical Modeling
A set of frequently used Bayesian parametric and nonparametric model structures, as well as a set of ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA