R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
RZooRoH
View on CRAN: Click
here
Download and install RZooRoH package within the R console
Install from CRAN:
install.packages("RZooRoH")
Install from Github:
library("remotes")
install_github("cran/RZooRoH")
Install by package version:
library("remotes")
install_version("RZooRoH", "0.3.2.1")
Attach the package and use:
library("RZooRoH")
Maintained by
Tom Druet
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-06-19
Latest Update: 2023-09-04
Description:
Functions to identify Homozygous-by-Descent (HBD) segments associated with runs of homozygosity (ROH) and to
estimate individual autozygosity (or inbreeding coefficient). HBD segments and autozygosity are assigned to multiple HBD classes
with a model-based approach relying on a mixture of exponential distributions. The rate of the exponential distribution is distinct
for each HBD class and defines the expected length of the HBD segments. These HBD classes are therefore related to the age of the
segments (longer segments and smaller rates for recent autozygosity / recent common ancestor). The functions allow to estimate the
parameters of the model (rates of the exponential distributions, mixing proportions), to estimate global and local autozygosity
probabilities and to identify HBD segments with the Viterbi decoding. The method is fully described in Druet and Gautier (2017)
.
How to cite:
Tom Druet (2018). RZooRoH: Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes. R package version 0.3.2.1, https://cran.r-project.org/web/packages/RZooRoH. Accessed 21 Dec. 2024.
Previous versions and publish date:
Other packages that cited RZooRoH R package
View RZooRoH citation profile
Other R packages that RZooRoH depends,
imports, suggests or enhances
Complete documentation for RZooRoH
Functions, R codes and Examples using
the RZooRoH R package
Some associated functions: BBB_NMP_GP_subset . BBB_NMP_ad_subset . BBB_NMP_pl_subset . BBB_PE_gt_subset . BBB_samples . RZooRoH . cumhbd . genoex . genosim . probhbd . rara_mix10r . realized . rohbd . soay_mix10r . typs . typsfrq . wilt_mix10r . zoodata . zoodoris . zoomodel . zooplot_hbdseg . zooplot_individuals . zooplot_partitioning . zooplot_prophbd . zoorun . zoosimd .
Some associated R codes: data.R . lib_kl.R . lib_kr.R . lib_mixkl.R . lib_mixkr.R . prob_emission.R . read_zdata.R . zooplot_segments.R . zooroh.R . zooroh_accessor.R . zooroh_model.R . zplot_individual.R . zplot_prophbd.R . zplot_vertical.R . Full RZooRoH package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by
helping add
Reviews / comments / questions /suggestions ↴↴↴
Today's Hot Picks in Authors and Packages
batteryreduction
Battery reduction is a method used in data reduction. It uses Gram-Schmidt orthogonal rotations to f ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Chunqiao Luo (view profile)
condGEE
Solves for the mean parameters, the variance parameter, and their asymptotic variance in a condition ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: David Clement (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
helda
The main focus is on preprocessing and data visualization of machine learning models performances.So ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Simon Corde (view profile)
SEIRfansy
Extended Susceptible-Exposed-Infected-Recovery Model for
handling high false negative rate and symp ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Michael Kleinsasser (view profile)
CIFsmry
Estimate of cumulative incidence function in two samples. Provide weighted summary statistics based ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Jianing Li (view profile)