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RNOmni
View on CRAN: Click
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Download and install RNOmni package within the R console
Install from CRAN:
install.packages("RNOmni")
Install from Github:
library("remotes")
install_github("cran/RNOmni")
Install by package version:
library("remotes")
install_version("RNOmni", "1.0.1.2")
Attach the package and use:
library("RNOmni")
Maintained by
Zachary McCaw
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-10-29
Latest Update: 2022-08-15
Description:
Inverse normal transformation (INT) based genetic association testing. These tests are recommend for continuous traits with non-normally distributed residuals. INT-based tests robustly control the type I error in settings where standard linear regression does not, as when the residual distribution exhibits excess skew or kurtosis. Moreover, INT-based tests outperform standard linear regression in terms of power. These tests may be classified into two types. In direct INT (D-INT), the phenotype is itself transformed. In indirect INT (I-INT), phenotypic residuals are transformed. The omnibus test (O-INT) adaptively combines D-INT and I-INT into a single robust and statistically powerful approach. See McCaw ZR, Lane JM, Saxena R, Redline S, Lin X. "Operating characteristics of the rank-based inverse normal transformation for quantitative trait analysis in genome-wide association studies" <doi:10.1111/biom.13214>.
How to cite:
Zachary McCaw (2017). RNOmni: Rank Normal Transformation Omnibus Test. R package version 1.0.1.2, https://cran.r-project.org/web/packages/RNOmni
Previous versions and publish date:
0.1.2 (2017-10-29 14:03), 0.1.3 (2017-11-02 20:12), 0.1.4 (2017-11-16 22:55), 0.1.5 (2018-02-13 00:30), 0.2.0 (2018-04-01 06:11), 0.2.1 (2018-04-02 11:44), 0.2.2 (2018-04-16 13:18), 0.3.0 (2018-04-18 09:59), 0.4.0 (2018-05-16 23:38), 0.5.0 (2018-09-14 09:50), 0.6.0 (2019-01-12 23:21), 0.7.1 (2019-04-28 09:10), 1.0.0 (2020-10-05 18:40), 1.0.1 (2022-08-15 22:50)
Other packages that cited RNOmni R package
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Other R packages that RNOmni depends,
imports, suggests or enhances
Functions, R codes and Examples using
the RNOmni R package
Some associated functions: BAT . BasicInputChecks . CauchyToP . DINT . FitOLS . IINT . OINT . OmniP . PartitionData . PtoCauchy . RNOmni-help . RankNorm .
Some associated R codes: BAT.R . CauchyCombination.R . DINT.R . IINT.R . InputCheck.R . OINT.R . PackageHelp.R . RN.R . RcppExports.R . Full RNOmni package functions and examples
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