Other packages > Find by keyword >

RNAsmc  

RNA Secondary Structure Module Mining, Comparison and Plotting
View on CRAN: Click here


Download and install RNAsmc package within the R console
Install from CRAN:
install.packages("RNAsmc")

Install from Github:
library("remotes")
install_github("cran/RNAsmc")

Install by package version:
library("remotes")
install_version("RNAsmc", "0.8.0")



Attach the package and use:
library("RNAsmc")
Maintained by
Zheng HeWei
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-08-23
Latest Update:
Description:
Provides function for RNA secondary structure plotting, comparison and module mining. Given a RNA secondary structure, you can obtain stem regions, hairpin loops, internal loops, bulge loops and multibranch loops of this RNA structure using this program. They are the basic modules of RNA secondary structure. For each module you get, you can use this program to label the RNA structure with a specific color. You can also use this program to compare two RNA secondary structures to get a score that represents similarity. Reference: Reuter JS, Mathews DH (2010) .
How to cite:
Zheng HeWei (2017). RNAsmc: RNA Secondary Structure Module Mining, Comparison and Plotting. R package version 0.8.0, https://cran.r-project.org/web/packages/RNAsmc. Accessed 15 Jul. 2026.
Previous versions and publish date:
(2026-07-09 08:19), 0.1.0 (2017-08-23 10:39), 0.2.0 (2018-03-12 10:34), 0.3.0 (2018-03-19 05:07), 0.4.0 (2018-12-11 06:20), 0.5.0 (2020-03-24 11:40), 0.6.0 (2020-03-29 01:30), 0.7.0 (2021-12-14 09:40), 0.8.0 (2023-01-12 09:20)
Other packages that cited RNAsmc R package
View RNAsmc citation profile
Other R packages that RNAsmc depends, imports, suggests or enhances
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

gamlss.add  
Extra Additive Terms for Generalized Additive Models for Location Scale and Shape
Interface for extra smooth functions including tensor products, neural networks and decision trees. ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
PermAlgo  
Permutational Algorithm to Simulate Survival Data
This version of the permutational algorithm generates a dataset in which event and censoring times ...
Download / Learn more Package Citations See dependency  
SECFISH  
Disaggregate Variable Costs
These functions were developed within SECFISH project (Strengthening regional cooperation in the are ...
Download / Learn more Package Citations See dependency  
footBayes  
Fitting Bayesian and MLE Football Models
This is the first package allowing for the estimation, visualization and prediction of the most wel ...
Download / Learn more Package Citations See dependency  
gscaLCA  
Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression
Execute Latent Class Analysis (LCA) and Latent Class Regression (LCR) by using Generalized Structu ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA