Other packages > Find by keyword >

RNAsmc  

RNA Secondary Structure Module Mining, Comparison and Plotting
View on CRAN: Click here


Download and install RNAsmc package within the R console
Install from CRAN:
install.packages("RNAsmc")

Install from Github:
library("remotes")
install_github("cran/RNAsmc")

Install by package version:
library("remotes")
install_version("RNAsmc", "0.8.0")



Attach the package and use:
library("RNAsmc")
Maintained by
Zheng HeWei
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-08-23
Latest Update:
Description:
Provides function for RNA secondary structure plotting, comparison and module mining. Given a RNA secondary structure, you can obtain stem regions, hairpin loops, internal loops, bulge loops and multibranch loops of this RNA structure using this program. They are the basic modules of RNA secondary structure. For each module you get, you can use this program to label the RNA structure with a specific color. You can also use this program to compare two RNA secondary structures to get a score that represents similarity. Reference: Reuter JS, Mathews DH (2010) .
How to cite:
Zheng HeWei (2017). RNAsmc: RNA Secondary Structure Module Mining, Comparison and Plotting. R package version 0.8.0, https://cran.r-project.org/web/packages/RNAsmc. Accessed 07 Aug. 2026.
Previous versions and publish date:
(2026-07-09 08:19), 0.1.0 (2017-08-23 10:39), 0.2.0 (2018-03-12 10:34), 0.3.0 (2018-03-19 05:07), 0.4.0 (2018-12-11 06:20), 0.5.0 (2020-03-24 11:40), 0.6.0 (2020-03-29 01:30), 0.7.0 (2021-12-14 09:40), 0.8.0 (2023-01-12 09:20)
Other packages that cited RNAsmc R package
View RNAsmc citation profile
Other R packages that RNAsmc depends, imports, suggests or enhances
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

BayesESS  
Determining Effective Sample Size
Determines effective sample size of a parametric prior distribution in Bayesian models. For a web-b ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
bbricks  
Bayesian Methods and Graphical Model Structures for Statistical Modeling
A set of frequently used Bayesian parametric and nonparametric model structures, as well as a set of ...
Download / Learn more Package Citations See dependency  
enrichwith  
Methods to Enrich R Objects with Extra Components
Provides the "enrich" method to enrich list-like R objects with new, relevant components. The curren ...
Download / Learn more Package Citations See dependency  
modelwordcloud  
Model Word Clouds
Makes a word cloud of text, sized by the frequency of the word, and colored either by user-specified ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA