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REPTILE
View on CRAN: Click
here
Download and install REPTILE package within the R console
Install from CRAN:
install.packages("REPTILE")
Install from Github:
library("remotes")
install_github("cran/REPTILE")
Install by package version:
library("remotes")
install_version("REPTILE", "1.0")
Attach the package and use:
library("REPTILE")
Maintained by
Yupeng He
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-06-21
Latest Update: 2016-06-21
Description:
Predicting regulatory DNA elements based on epigenomic signatures. This package is more of a set of building blocks than a direct solution. REPTILE regulatory prediction pipeline is built on this R package. See <https://github.com/yupenghe/REPTILE> for more information.
How to cite:
Yupeng He (2016). REPTILE: Regulatory DNA Element Prediction. R package version 1.0, https://cran.r-project.org/web/packages/REPTILE
Previous versions and publish date:
No previous versions
Other packages that cited REPTILE R package
View REPTILE citation profile
Other R packages that REPTILE depends,
imports, suggests or enhances
Functions, R codes and Examples using
the REPTILE R package
Some associated functions: REPTILE-package . calculate_epimark_deviation . get_option_parser_compute_score . get_option_parser_evaluation . get_option_parser_training . read_epigenomic_data . read_label . reptile_eval_prediction . reptile_predict . reptile_predict_genome_wide . reptile_predict_one_mode . reptile_train . reptile_train_one_mode . rsd .
Some associated R codes: calculate_epimark_deviation.R . get_option_parser_compute_score.R . get_option_parser_evaluation.R . get_option_parser_training.R . read_epigenomic_data.R . read_label.R . reptile_eval_prediction.R . reptile_predict.R . reptile_predict_genome_wide.R . reptile_predict_one_mode.R . reptile_train.R . reptile_train_one_mode.R . Full REPTILE package functions and examples
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