Other packages > Find by keyword >

RANKS  

Ranking of Nodes with Kernelized Score Functions
View on CRAN: Click here


Download and install RANKS package within the R console
Install from CRAN:
install.packages("RANKS")

Install from Github:
library("remotes")
install_github("cran/RANKS")

Install by package version:
library("remotes")
install_version("RANKS", "1.1")



Attach the package and use:
library("RANKS")
Maintained by
Giorgio Valentini
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-12-10
Latest Update: 2022-09-20
Description:
Implementation of Kernelized score functions and other semi-supervised learning algorithms for node label ranking to analyze biomolecular networks. RANKS can be easily applied to a large set of different relevant problems in computational biology, ranging from automatic protein function prediction, to gene disease prioritization and drug repositioning, and more in general to any bioinformatics problem that can be formalized as a node label ranking problem in a graph. The modular nature of the implementation allows to experiment with different score functions and kernels and to easily compare the results with baseline network-based methods such as label propagation and random walk algorithms, as well as to enlarge the algorithmic scheme by adding novel user-defined score functions and kernels.
How to cite:
Giorgio Valentini (2015). RANKS: Ranking of Nodes with Kernelized Score Functions. R package version 1.1, https://cran.r-project.org/web/packages/RANKS. Accessed 06 Nov. 2024.
Previous versions and publish date:
1.0 (2015-12-10 10:04)
Other packages that cited RANKS R package
View RANKS citation profile
Other R packages that RANKS depends, imports, suggests or enhances
Complete documentation for RANKS
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

equatiomatic  
Transform Models into 'LaTeX' Equations
The goal of equatiomatic is to reduce the painassociated with writing LaTeX formulas from fitted mod ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
ddp  
Desirable Dietary Pattern
The desirable Dietary Pattern (DDP)/ PPH score measures the variety of food consumption. The (weigh ...
Download / Learn more Package Citations See dependency  
mailR  
A Utility to Send Emails from R
Interface to Apache Commons Email to send emails from R. ...
Download / Learn more Package Citations See dependency  
maic  
Matching-Adjusted Indirect Comparison
A generalised workflow for generation of subject weights to be used in Matching-Adjusted Indirect C ...
Download / Learn more Package Citations See dependency  
memoise  
'Memoisation' of Functions
Cache the results of a function so that when you call it again with the same arguments it returns t ...
Download / Learn more Package Citations See dependency  

23,092

R Packages

198,677

Dependencies

62,675

Author Associations

23,089

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA