Other packages > Find by keyword >

QuasiSeq  

Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
View on CRAN: Click here


Download and install QuasiSeq package within the R console
Install from CRAN:
install.packages("QuasiSeq")

Install from Github:
library("remotes")
install_github("cran/QuasiSeq")

Install by package version:
library("remotes")
install_version("QuasiSeq", "1.0-11-0")



Attach the package and use:
library("QuasiSeq")
Maintained by
Steve Lund
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2012-04-15
Latest Update:
Description:
Identify differentially expressed genes in RNA-seq count data using quasi-Poisson or quasi-negative binomial models with QL QLShrink and QLSpline methods described by Lund Nettleton McCarthy and Smyth 2012 DOI10.15151544-6115.1826. Report bias-reduced estimates of log fold changes.
How to cite:
Steve Lund (2012). QuasiSeq: Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood. R package version 1.0-11-0, https://cran.r-project.org/web/packages/QuasiSeq. Accessed 02 Nov. 2026.
Previous versions and publish date:
(2026-07-09 08:17), 1.0-1 (2012-04-15 19:23), 1.0-2 (2012-06-25 19:01), 1.0-3 (2014-02-13 00:20), 1.0-4 (2014-04-14 20:03), 1.0-5 (2015-01-05 20:58), 1.0-6 (2015-02-03 06:38), 1.0-7 (2015-05-14 01:49), 1.0-8 (2015-05-15 09:13), 1.0-10-1 (2017-07-09 22:55), 1.0-10-2 (2018-05-10 23:32), 1.0-11-0 (2022-08-15 13:40)
Other packages that cited QuasiSeq R package
View QuasiSeq citation profile
Other R packages that QuasiSeq depends, imports, suggests or enhances
Functions, R codes and Examples using the QuasiSeq R package
Some associated functions: NBDev . PoisDev . QL.fit . QL.results . coef.glm . fbrNBglm . glmSolve . mockRNASeqData . negbin . nlSolve . 
Some associated R codes: NBDev.R . PoisDev.R . QL.fit.R . QL.results.R . bartlettGlm.R . coefglm.R . fbrNBglm.R . glm.fit3.R . glmsolve.R . mockRNASeqData.R . negbin.R . nlsolve.R . utils.R .  Full QuasiSeq package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

SemiEstimate  
Solve Semi-Parametric Estimation by Implicit Profiling
Semi-parametric estimation problem can be solved by two-step Newton-Raphson iteration. The implicit ...
Download / Learn more Package Citations See dependency  
EDOtrans  
Euclidean Distance-Optimized Data Transformation
A data transformation method which takes into account the special property of scale non-invariance w ...
Download / Learn more Package Citations See dependency  
aws.translate  
Client for 'AWS Translate'
A client for 'AWS Translate' , a machine translation ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
VFP  
Variance Function Program
Variance function estimation for models proposed by W. Sadler in his variance function program ('VF ...
Download / Learn more Package Citations See dependency  
palaeoverse  
Prepare and Explore Data for Palaeobiological Analyses
Provides functionality to support data preparation and exploration for palaeobiological analyses, i ...
Download / Learn more Package Citations See dependency  

29,315

R Packages

247,686

Dependencies

77,531

Author Associations

29,316

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA