Other packages > Find by keyword >

QTLRel  

Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees
View on CRAN: Click here


Download and install QTLRel package within the R console
Install from CRAN:
install.packages("QTLRel")

Install from Github:
library("remotes")
install_github("cran/QTLRel")

Install by package version:
library("remotes")
install_version("QTLRel", "1.15")



Attach the package and use:
library("QTLRel")
Maintained by
Riyan Cheng
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2010-12-24
Latest Update: 2023-08-08
Description:
This software provides tools for quantitative trait mapping in populations such as advanced intercross lines where relatedness among individuals should not be ignored. It can estimate background genetic variance components, impute missing genotypes, simulate genotypes, perform a genome scan for putative quantitative trait loci (QTL), and plot mapping results. It also has functions to calculate identity coefficients from pedigrees, especially suitable for pedigrees that consist of a large number of generations, or estimate identity coefficients from genotypic data in certain circumstances.
How to cite:
Riyan Cheng (2010). QTLRel: Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees. R package version 1.15, https://cran.r-project.org/web/packages/QTLRel. Accessed 25 Aug. 2026.
Previous versions and publish date:
(2026-07-09 08:17), 0.1 (2010-12-24 16:28), 0.2-1 (2011-03-14 09:31), 0.2-2 (2011-03-16 17:20), 0.2-3 (2011-03-22 08:24), 0.2-4 (2011-03-29 12:25), 0.2-5 (2011-04-14 19:20), 0.2-6 (2011-04-23 22:54), 0.2-7 (2011-05-19 06:20), 0.2-8 (2011-06-28 17:36), 0.2-9 (2011-07-23 15:03), 0.2-10 (2011-11-30 08:21), 0.2-11 (2012-04-04 08:21), 0.2-12 (2012-11-15 14:04), 0.2-14 (2013-12-12 02:11), 0.2-15 (2015-11-12 08:42), 0.2-16 (2017-07-20 20:23), 0.2-17 (2017-07-25 22:31), 0.2 (2011-03-11 14:56), 1.0 (2018-01-10 20:15), 1.1 (2019-03-25 06:26), 1.4 (2019-11-09 11:00), 1.5 (2020-01-31 21:10), 1.6 (2020-02-19 06:20), 1.7 (2021-12-08 10:10), 1.8 (2022-02-07 21:10), 1.9 (2022-03-09 23:20), 1.11 (2022-06-17 22:20), 1.12 (2022-11-04 16:20), 1.14 (2023-08-08 21:50)
Other packages that cited QTLRel R package
View QTLRel citation profile
Other R packages that QTLRel depends, imports, suggests or enhances
Complete documentation for QTLRel
Functions, R codes and Examples using the QTLRel R package
Some associated functions: aicVC . blup . cic . eigen_sym . estVC . genMatrix . genoImpute . genoProb . genoSim . gls . hapSim . ibs . kinship . lodci . mAIC . misFct . miscEx . nullSim . pedRecode . plots . qqplot . qtl2rel . qtlVar . rel2qtl . rem . scanOne . scanTwo . 
Some associated R codes: aic.R . eigen_sym.R . estVC.R . hapSim.R . herit.R . ibsFn.R . idcoef.R . imFn.R . lodci.R . nullSim.R . pedRecode.R . plots.R . qqPlot.R . qtl2rel.R . rel2qtl.R . rem.R . scan.R . zzz.R .  Full QTLRel package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

connectwidgets  
Organize and Curate Your Content Within 'Posit Connect'
A collection of helper functions and 'htmlwidgets' to help publishers curate content collections on ...
Download / Learn more Package Citations See dependency  
commonsMath  
JAR Files of the Apache Commons Mathematics Library
'Java' JAR files for the Apache Commons Mathematics Library for use by users and other packages. ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
hwep  
Hardy-Weinberg Equilibrium in Polyploids
Inference concerning equilibrium and random mating in autopolyploids. Methods are available to test ...
Download / Learn more Package Citations See dependency  
missDiag  
Comparing Observed and Imputed Values under MAR and MCAR
Implements the computation of discrepancy statistics summarizing differences between the density of ...
Download / Learn more Package Citations See dependency  

28,332

R Packages

239,283

Dependencies

75,113

Author Associations

28,333

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA