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QTL.gCIMapping.GUI  

QTL Genome-Wide Composite Interval Mapping with Graphical User Interface
View on CRAN: Click here


Download and install QTL.gCIMapping.GUI package within the R console
Install from CRAN:
install.packages("QTL.gCIMapping.GUI")

Install from Github:
library("remotes")
install_github("cran/QTL.gCIMapping.GUI")

Install by package version:
library("remotes")
install_version("QTL.gCIMapping.GUI", "2.1.1")



Attach the package and use:
library("QTL.gCIMapping.GUI")
Maintained by
Yuanming Zhang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-06-15
Latest Update: 2020-10-12
Description:
Conduct multiple quantitative trait loci (QTL) mapping under the framework of random-QTL-effect linear mixed model. First, each position on the genome is detected in order to obtain a negative logarithm P-value curve against genome position. Then, all the peaks on each effect (additive or dominant) curve are viewed as potential QTL, all the effects of the potential QTL are included in a multi-QTL model, their effects are estimated by empirical Bayes in doubled haploid population or by adaptive lasso in F2 population, and true QTL are identified by likelihood radio test. See Wen et al. (2018) .
How to cite:
Yuanming Zhang (2018). QTL.gCIMapping.GUI: QTL Genome-Wide Composite Interval Mapping with Graphical User Interface. R package version 2.1.1, https://cran.r-project.org/web/packages/QTL.gCIMapping.GUI
Previous versions and publish date:
1.0 (2018-06-15 17:26), 2.0 (2019-11-12 00:50), 2.1 (2020-05-01 09:10)
Other packages that cited QTL.gCIMapping.GUI R package
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Other R packages that QTL.gCIMapping.GUI depends, imports, suggests or enhances
Functions, R codes and Examples using the QTL.gCIMapping.GUI R package
Some associated functions: QTL.gCIMapping.GUI . WangF . WangS . WenF . WenS . gen . genf2 . map . mapf2 . markerinsert . phe . phef2 . 
Some associated R codes: QTL.gCIMapping.GUI.R . RcppExports.R . WangF.R .  Full QTL.gCIMapping.GUI package functions and examples
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