Other packages > Find by keyword >

PopED  

Population (and Individual) Optimal Experimental Design
View on CRAN: Click here


Download and install PopED package within the R console
Install from CRAN:
install.packages("PopED")

Install from Github:
library("remotes")
install_github("cran/PopED")

Install by package version:
library("remotes")
install_version("PopED", "0.7.0")



Attach the package and use:
library("PopED")
Maintained by
Andrew C. Hooker
[Scholar Profile | Author Map]
First Published: 2014-04-28
Latest Update: 2021-05-21
Description:
Optimal experimental designs for both population and individual studies based on nonlinear mixed-effect models. Often this is based on a computation of the Fisher Information Matrix. This package was developed for pharmacometric problems, and examples and predefined models are available for these types of systems. The methods are described in Nyberg et al. (2012) , and Foracchia et al. (2004) .
How to cite:
Andrew C. Hooker (2014). PopED: Population (and Individual) Optimal Experimental Design. R package version 0.7.0, https://cran.r-project.org/web/packages/PopED. Accessed 10 Jan. 2025.
Previous versions and publish date:
0.1.0 (2014-04-28 11:08), 0.1.1 (2014-05-27 15:44), 0.1.2 (2014-11-19 14:03), 0.2.0 (2015-03-20 18:04), 0.3.0 (2015-12-29 22:29), 0.3.1 (2016-10-19 13:07), 0.3.2 (2016-12-12 18:16), 0.4.0 (2018-09-10 11:40), 0.5.0 (2020-06-13 16:50), 0.6.0 (2021-05-21 16:50)
Other packages that cited PopED R package
View PopED citation profile
Other R packages that PopED depends, imports, suggests or enhances
Complete documentation for PopED
Functions, R codes and Examples using the PopED R package
Some associated functions: Doptim . Dtrace . LEDoptim . LinMatrixH . LinMatrixL . LinMatrixLH . LinMatrixL_occ . PopED . RS_opt . a_line_search . bfgsb_min . blockexp . blockfinal . blockheader . blockopt . build_sfg . calc_autofocus . calc_ofv_and_fim . calc_ofv_and_grad . cell . convert_variables . create.poped.database . create_design . create_design_space . design_summary . diag_matlab . downsizing_general_design . ed_laplace_ofv . ed_mftot . efficiency . evaluate.e.ofv.fim . evaluate.fim . evaluate_design . evaluate_fim_map . evaluate_power . extract_norm_group_fim . feps.add . feps.add.prop . feps.prop . feval . ff.PK.1.comp.oral.md.CL . ff.PK.1.comp.oral.md.KE . ff.PK.1.comp.oral.sd.CL . ff.PK.1.comp.oral.sd.KE . ff.PKPD.1.comp.oral.md.CL.imax . ff.PKPD.1.comp.sd.CL.emax . fileparts . getTruncatedNormal . get_all_params . get_rse . get_unfixed_params . getfulld . gradf_eps . inv . isempty . log_prior_pdf . mc_mean . median_hilow_poped . mf3 . mf7 . mfea . mftot . model_prediction . ofv_criterion . ofv_fim . ones . optim_ARS . optim_LS . optimize_groupsize . optimize_n_eff . optimize_n_rse . pargen . plot_efficiency_of_windows . plot_model_prediction . poped.choose . poped_gui . poped_optim . poped_optim_1 . poped_optim_2 . poped_optim_3 . poped_optimize . rand . randn . shrinkage . size . start_parallel . summary.poped_optim . test_mat_size . tic . toc . tryCatch.W.E . zeros . 
Some associated R codes: Doptim.R . Dtrace.R . LEDoptim.R . LinMatrixH.R . LinMatrixL.R . LinMatrixLH.R . LinMatrixL_occ.R . PopED.R . RS_opt.R . a_line_search.R . add_to_poped_db.R . bfgsb_min.R . blockexp.R . blockfinal.R . blockheader.R . blockopt.R . blockoptwrt.R . blockother.R . build_sfg.R . calc_ofv_and_fim.R . cauchy_point.R . cell.R . convert_variables.R . create.poped.database.R . create_design.R . create_design_space.R . create_ofv.R . d2fimdalpha2.R . design_summary.R . dfimdalpha.R . diag_matlab.R . downsizing_general_design.R . ed_laplace_ofv.R . ed_mftot.R . efficiency.R . evaluate.e.ofv.fim.R . evaluate.fim.R . evaluate_design.R . evaluate_fim_map.R . evaluate_power.R . feval.R . fileparts.R . find.largest.index.R . fprintf.R . getTruncatedNormal.R . get_all_params.R . get_cv.R . get_discrete_x.R . get_fim_size.R . get_unfixed_params.R . getfulld.R . grad_all.R . grad_bpop.R . graddetmf.R . graddetmf_ext.R . gradff.R . gradfg.R . gradfg_occ.R . gradofv_a.R . gradofv_xt.R . gradtrmf.R . grouped_rand.R . grouped_rand_a.R . helper.R . hessian_eta_complex.R . hesskalpha2.R . ind_estimates.R . ind_likelihood.R . inv.R . isempty.R . line_search.R . line_search_uc.R . linspace.R . log_prior_pdf.R . m1.R . m2.R . m3.R . mc_mean.R . median_hilow_poped.R . mf3.R . mf7.R . mf_all.R . mf_all_loq.R . mfea.R . mftot.R . model_prediction.R . models.R . numel.R . ofv_criterion.R . ofv_fim.R . ofv_optim.R . ones.R . optim_ARS.R . optim_LS.R . optimize_n.R . par_and_space_tbl.R . pargen.R . plot_efficiency_of_windows.R . plot_model_prediction.R . poped_gui.R . poped_optim.R . poped_optim_1.R . poped_optim_2.R . poped_optim_3.R . poped_optimize.R . rand.R . randn.R . shrinkage.R . size.R . start_parallel.R . subspace_min.R . summary.poped_optim.R . test_mat_size.R . tic.R . toc.R . trace_matrix.R . update_designinlist.R . update_offdiag.R . v.R . write_iterationfile.R . write_matrix.R . zeros.R . zzz.R .  Full PopED package functions and examples
Downloads during the last 30 days
12/1112/1212/1312/1412/1512/1612/1712/1812/1912/2012/2112/2212/2312/2412/2512/2612/2712/2812/2912/3012/3101/0101/0201/0301/0401/0501/0601/0701/08Downloads for PopED051015202530354045TrendBars
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

Q7  
Types and Features for Object Oriented Programming
Construct message-passing style objects with types and features. Q7 types uses composition instead ...
Download / Learn more Package Citations See dependency  
pould  
Phased or Unphased Linkage Disequilibrium
Computes the D', Wn, and conditional asymmetric linkage disequilibrium (ALD) measures for pairs of g ...
Download / Learn more Package Citations See dependency  
basetheme  
Themes for Base Graphics Plots
Functions to create and select graphical themes for the base plotting system. Contains: 1) several c ...
Download / Learn more Package Citations See dependency  
knitrBootstrap  
'knitr' Bootstrap Framework
A framework to create Bootstrap HTML reports from 'knitr' 'rmarkdown'. ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
daterangepicker  
Create a Shiny Date-Range Input
A Shiny Input for date-ranges, which pops up two calendars for selecting dates, times, or predefined ...
Download / Learn more Package Citations See dependency  

23,440

R Packages

202,297

Dependencies

63,567

Author Associations

23,441

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA